RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 JPH1Q9HDC5 661 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-201ENST00000311943 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-201ENST00000311943 CHMP2AO43633 222 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 NONOQ15233 471 aaKnown RBP eCLIP13.69□□□□□ -0.22
SCFD1-201ENST00000311943 KCNV1Q6PIU1 500 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-201ENST00000311943 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
SCFD1-201ENST00000311943 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 TREHO43280 583 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 RAG1P15918 1043 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 ATP4AP20648 1035 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 CIITAP33076 1130 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-201ENST00000311943 BICD2Q8TD16 824 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 TOX2Q96NM4 488 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 SLC9A2Q9UBY0 812 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 TMEM150BA6NC51 233 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 CABYRO75952 493 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 CAPN2P17655 700 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 GJB2P29033 226 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 KRT2P35908 639 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 GPNMBQ14956 572 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 SHHQ15465 462 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 PTGISQ16647 500 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 C8orf76Q96K31 380 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 NOC4LQ9BVI4 516 aaKnown RBP13.68□□□□□ -0.22
SCFD1-201ENST00000311943 EHMT1Q9H9B1 1298 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-201ENST00000311943 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
SCFD1-201ENST00000311943 CCDC194A0A1B0GVG4 234 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
SCFD1-201ENST00000311943 SMIM10L2AP0DMW4 78 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 SMIM10L2BP0DMW5 78 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 IGBP1P78318 339 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 UGCGQ16739 394 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 BRDTQ58F21 947 aaPredicted RBP13.67□□□□□ -0.22
SCFD1-201ENST00000311943 C7orf31Q8N865 590 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 SEPT1Q8WYJ6 367 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
SCFD1-201ENST00000311943 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 UNC45AQ9H3U1 944 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 HIPK3Q9H422 1215 aa13.67□□□□□ -0.22
SCFD1-201ENST00000311943 A0A087WWV3 80 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 EML1O00423 815 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 FAM109BQ6ICB4 259 aaPredicted RBP13.66□□□□□ -0.22
SCFD1-201ENST00000311943 SWSAP1Q6NVH7 229 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 HAS1Q92839 578 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 GLG1Q92896 1179 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 PRKAG2Q9UGJ0 569 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
SCFD1-201ENST00000311943 TIMP1P01033 207 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 USP11P51784 963 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 HABP4Q5JVS0 413 aaKnown RBP13.66□□□□□ -0.22
SCFD1-201ENST00000311943 NFRKBQ6P4R8 1299 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 RUFY4Q6ZNE9 571 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 KRT25Q7Z3Z0 450 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 DEFB128Q7Z7B8 93 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 NEK8Q86SG6 692 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 FBXO18Q8NFZ0 1043 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 ETNPPLQ8TBG4 499 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 SDF4Q9BRK5 362 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
SCFD1-201ENST00000311943 TMEM60Q9H2L4 133 aa13.66□□□□□ -0.22
SCFD1-201ENST00000311943 MARCH8Q5T0T0 291 aa13.65□□□□□ -0.22
SCFD1-201ENST00000311943 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
SCFD1-201ENST00000311943 WASF1Q92558 559 aa13.65□□□□□ -0.22
SCFD1-201ENST00000311943 CDHR1Q96JP9 859 aa13.65□□□□□ -0.22
SCFD1-201ENST00000311943 TET1Q8NFU7 2136 aa13.65□□□□□ -0.22
SCFD1-201ENST00000311943 NFASCO94856 1347 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 MAFGO15525 162 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF862O60290 1169 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 KPNA6O60684 536 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 PSMD10O75832 226 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 ATG7O95352 703 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 XBP1P17861 261 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 MBTPS1Q14703 1052 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.231e-9■□□□□ 11.2
SCFD1-201ENST00000311943 WRAP73Q9P2S5 460 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-201ENST00000311943 CYP3A7-CYP3A51PA0A087WV96 503 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 GRXCR1A8MXD5 290 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 CTSHP09668 335 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 CYP3A7P24462 503 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-201ENST00000311943 STAT5BP51692 787 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 TRIM29Q14134 588 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 PLCB4Q15147 1175 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF174Q15697 407 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 Q4G0T1 1027 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 LRCH2Q5VUJ6 765 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 GALNT17Q6IS24 598 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms