RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 CRAMP1Q96RY5 1269 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 A0A087X0T9 212 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 TULP2O00295 520 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 FAM228BP0C875 321 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 PPP1R18Q6NYC8 613 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 KCTD10Q9H3F6 313 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 ESYT3A0FGR9 886 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 CCDC70Q6NSX1 233 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 KIAA0825Q8IV33 1275 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 TRIM59Q8IWR1 403 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 SP8Q8IXZ3 490 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 GOLGA6L1Q8N7Z2 621 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 SWAP70Q9UH65 585 aa27.93■■■□□ 2.06
HOXB3-201ENST00000311626 DDTLA6NHG4 134 aaPredicted RBP27.92■■■□□ 2.06
HOXB3-201ENST00000311626 PJA2O43164 708 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 HLA-DOAP06340 250 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 ADRA2BP18089 450 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 GOLPH3Q9H4A6 298 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 FAM184BQ9ULE4 1060 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 LY75O60449 1722 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 GOLGA6BA6NDN3 693 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 TCP1P17987 556 aaKnown RBP27.92■■■□□ 2.06
HOXB3-201ENST00000311626 MAPK8IP2Q13387 824 aaPredicted RBP27.92■■■□□ 2.06
HOXB3-201ENST00000311626 SLFN13Q68D06 897 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 TSEN2Q8NCE0 465 aaKnown RBP27.92■■■□□ 2.06
HOXB3-201ENST00000311626 NT5C3AQ9H0P0 336 aa27.92■■■□□ 2.06
HOXB3-201ENST00000311626 GDF11O95390 407 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 EPS15P42566 896 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 RBM5P52756 815 aaKnown RBP eCLIP27.91■■■□□ 2.06
HOXB3-201ENST00000311626 CYP4A11Q02928 519 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 CATSPER3Q86XQ3 398 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 GJD4Q96KN9 370 aaPredicted RBP27.91■■■□□ 2.06
HOXB3-201ENST00000311626 IKZF4Q9H2S9 585 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 SERPING1P05155 500 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 SLC9A1P19634 815 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 PAFAH1B1P43034 410 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 KCNH2Q12809 1159 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 SEPT2Q15019 361 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 SEPT12Q8IYM1 358 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 ATP6V0A2Q9Y487 856 aa27.91■■■□□ 2.06
HOXB3-201ENST00000311626 C10orf67Q8IYJ2 551 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 CYP2W1Q8TAV3 490 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 KCNMB3Q9NPA1 279 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 ZNF219Q9P2Y4 722 aaPredicted RBP27.9■■■□□ 2.06
HOXB3-201ENST00000311626 RSPH14Q9UHP6 348 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 ARFGEF1Q9Y6D6 1849 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 SSU72P8A0A1W2PR75 194 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 RSPH10B2B2RC85 870 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 MEIS2O14770 477 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 RSPH10BP0C881 870 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 GCFC2P16383 781 aaKnown RBP27.9■■■□□ 2.06
HOXB3-201ENST00000311626 NR2F2P24468 414 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 KLHL30Q0D2K2 578 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 IKQ13123 557 aaPredicted RBP27.9■■■□□ 2.06
HOXB3-201ENST00000311626 TEKT1Q969V4 418 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 DHX36Q9H2U1 1008 aaKnown RBP27.9■■■□□ 2.06
HOXB3-201ENST00000311626 MYH4Q9Y623 1939 aa27.9■■■□□ 2.06
HOXB3-201ENST00000311626 HOXA13P31271 388 aaPredicted RBP27.89■■■□□ 2.06
HOXB3-201ENST00000311626 SLC12A3P55017 1021 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 KIAA0753Q2KHM9 967 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 DNAJC21Q5F1R6 531 aaKnown RBP27.89■■■□□ 2.06
HOXB3-201ENST00000311626 HYIQ5T013 277 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 TTC19Q6DKK2 380 aaPredicted RBP27.89■■■□□ 2.06
HOXB3-201ENST00000311626 KDM3AQ9Y4C1 1321 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 FOCADQ5VW36 1801 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 PRLRP16471 622 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 CRKP46108 304 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 SFR1Q86XK3 245 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 EHD4Q9H223 541 aa27.89■■■□□ 2.06
HOXB3-201ENST00000311626 CWC15Q9P013 229 aaKnown RBP27.89■■■□□ 2.06
HOXB3-201ENST00000311626 MYBP10242 640 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 ARHGAP4P98171 946 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 C8orf74Q6P047 294 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 PROCA1Q8NCQ7 364 aaPredicted RBP27.88■■■□□ 2.05
HOXB3-201ENST00000311626 CEP63Q96MT8 703 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 SFI1A8K8P3 1242 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 GLI1P08151 1106 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 TRADDQ15628 312 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 SIAH1Q8IUQ4 282 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 IFT81Q8WYA0 676 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 STIM2Q9P246 746 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 CERKLQ49MI3 558 aaPredicted RBP27.88■■■□□ 2.05
HOXB3-201ENST00000311626 HDAC9Q9UKV0 1011 aa27.88■■■□□ 2.05
HOXB3-201ENST00000311626 HOXD13P35453 343 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 KCNA1Q09470 495 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 GIT2Q14161 759 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 REEP2Q9BRK0 252 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 RRP15Q9Y3B9 282 aaKnown RBP27.87■■■□□ 2.05
HOXB3-201ENST00000311626 FAM86B1E9PN63 330 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 FAM86B2P0C5J1 330 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 ASIC2Q16515 512 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 DCAF17Q5H9S7 520 aaPredicted RBP27.87■■■□□ 2.05
HOXB3-201ENST00000311626 ZNF572Q7Z3I7 529 aaPredicted RBP27.87■■■□□ 2.05
HOXB3-201ENST00000311626 GANQ9H2C0 597 aa27.87■■■□□ 2.05
HOXB3-201ENST00000311626 FEZ2Q9UHY8 353 aaPredicted RBP27.87■■■□□ 2.05
HOXB3-201ENST00000311626 MYO1CO00159 1063 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 FAM153BP0C7A2 387 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 CARSP49589 748 aaKnown RBP27.86■■■□□ 2.05
HOXB3-201ENST00000311626 FAM153CQ494X1 144 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 SH3BP5LQ7L8J4 393 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms