RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PRPF4BQ13523 1007 aaKnown RBP16.07■□□□□ 0.16
COL6A2-202ENST00000310645 CUL1Q13616 776 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 SNX29Q8TEQ0 813 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
COL6A2-202ENST00000310645 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
COL6A2-202ENST00000310645 KLRK1P26718 216 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 LRRC63Q05C16 580 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 KCNK18Q7Z418 384 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 MYOCDQ8IZQ8 938 aa16.07■□□□□ 0.16
COL6A2-202ENST00000310645 NSUN4Q96CB9 384 aaKnown RBP16.07■□□□□ 0.16
COL6A2-202ENST00000310645 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 FAM133BQ5BKY9 247 aaKnown RBP16.06■□□□□ 0.16
COL6A2-202ENST00000310645 TBC1D1Q86TI0 1168 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-202ENST00000310645 CCDC50Q8IVM0 306 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 METTL13Q8N6R0 699 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 TATDN2Q93075 761 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 THOC1Q96FV9 657 aaKnown RBP16.06■□□□□ 0.16
COL6A2-202ENST00000310645 SPAG5Q96R06 1193 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 GGT7Q9UJ14 662 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 MYH3P11055 1940 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 MARCH6O60337 910 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 GNAQP50148 359 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 FKBP3Q00688 224 aaKnown RBP16.06■□□□□ 0.16
COL6A2-202ENST00000310645 CALCRLQ16602 461 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 PNMA5Q96PV4 448 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 TRIM51Q9BSJ1 452 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
COL6A2-202ENST00000310645 BUB1BO60566 1050 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-202ENST00000310645 PTK2Q05397 1052 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 PEX26Q7Z412 305 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 FAM84BQ96KN1 310 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-202ENST00000310645 PSMD1Q99460 953 aa16.06■□□□□ 0.16
COL6A2-202ENST00000310645 COPB2P35606 906 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 GRM4Q14833 912 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 C1orf131Q8NDD1 294 aaKnown RBP16.05■□□□□ 0.16
COL6A2-202ENST00000310645 TACO1Q9BSH4 297 aaKnown RBP16.05■□□□□ 0.16
COL6A2-202ENST00000310645 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 FGFBP2Q9BYJ0 223 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 CCDC113Q9H0I3 377 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 NOD2Q9HC29 1040 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 UBR2Q8IWV8 1755 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 A0A1B0GUA9 196 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 CHMP6Q96FZ7 201 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 UBA5Q9GZZ9 404 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 L3MBTL1Q9Y468 752 aa16.05■□□□□ 0.16
COL6A2-202ENST00000310645 CAND2O75155 1236 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 DRD4P21917 467 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 SLC8A1P32418 973 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 IFNAR2P48551 515 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 DAAM2Q86T65 1068 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 CCDC197Q8NCU1 140 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 CCT6BQ92526 530 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 STAMBPL1Q96FJ0 436 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 NUCKS1Q9H1E3 243 aaKnown RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 COL1A1P02452 1464 aaPredicted RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 DOCK2Q92608 1830 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 PVALEFA0A1B0GWK0 134 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 TRIM37O94972 964 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 TDP2O95551 362 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 MYBP10242 640 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 USP11P51784 963 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 ELF3P78545 371 aaPredicted RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 MTMR3Q13615 1198 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 XPO6Q96QU8 1125 aaKnown RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 EDEM3Q9BZQ6 932 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 TMEM59LQ9UK28 342 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 ADAMTS2O95450 1211 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 KRT79Q5XKE5 535 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 TEX11Q8IYF3 940 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 CCDC63Q8NA47 563 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 ELAC2Q9BQ52 826 aaKnown RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
COL6A2-202ENST00000310645 ARPP21Q9UBL0 812 aaPredicted RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
COL6A2-202ENST00000310645 ATP6V1G2O95670 118 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 VIMP08670 466 aaKnown RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 CDC25CP30307 473 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 TMEM266Q2M3C6 531 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 TMC3Q7Z5M5 1100 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 ALS2Q96Q42 1657 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 CCT8L1PA6NM43 557 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 SRRM3A6NNA2 597 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 HGSO14964 777 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 SLC37A4O43826 429 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms