RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 IQCEQ6IPM2 695 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 TATDN1Q6P1N9 297 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 SLFN12Q8IYM2 578 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 ALS2CR12Q96Q35 445 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 CRACR2AQ9BSW2 395 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 GANQ9H2C0 597 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 SMARCAL1Q9NZC9 954 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 SCN9AQ15858 1988 aa16.79■□□□□ 0.28
SPIRE1-201ENST00000309836 SERPING1P05155 500 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 ICA1Q05084 483 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 ITIH3Q06033 890 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 Q4G0T1 1027 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 PRR16Q569H4 304 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 CATSPER3Q86XQ3 398 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 ACBD3Q9H3P7 528 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 MED4Q9NPJ6 270 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 PI4KBQ9UBF8 816 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 GDF11O95390 407 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 SYF2O95926 243 aaKnown RBP16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 SPATA31C1P0DKV0 1188 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 MMP14P50281 582 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 JAG1P78504 1218 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 GIT2Q14161 759 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 EDRF1Q3B7T1 1238 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 DACT2Q5SW24 774 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 KLHDC7AQ5VTJ3 777 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 PODNQ7Z5L7 613 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 MASTLQ96GX5 879 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 MRIQ9BWK5 157 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 TLR10Q9BXR5 811 aa16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 NUCKS1Q9H1E3 243 aaKnown RBP16.78■□□□□ 0.28
SPIRE1-201ENST00000309836 MYH10P35580 1976 aa16.77■□□□□ 0.28
SPIRE1-201ENST00000309836 F5H6K3 240 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 MEIS1O00470 390 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 BUB1O43683 1085 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 NDUFB10O96000 172 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 TCP1P17987 556 aaKnown RBP16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 CXCR5P32302 372 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 HOXD13P35453 343 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 PDE6BP35913 854 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 KLRC3Q07444 240 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 ADAM9Q13443 819 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 SLC9C1Q4G0N8 1177 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 DPY19L2P1Q6NXN4 242 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 GMCL1P1Q8NEA9 526 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 SPATA4Q8NEY3 305 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 AENQ8WTP8 325 aaKnown RBP16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 HDAC7Q8WUI4 952 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 GDAP1L1Q96MZ0 367 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 PSMB7Q99436 277 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 AMNQ9BXJ7 453 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 ZHX3Q9H4I2 956 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 FAM184BQ9ULE4 1060 aa16.77■□□□□ 0.27
SPIRE1-201ENST00000309836 FAM86B1E9PN63 330 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 OPLAHO14841 1288 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 TBX3O15119 743 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 PHACTR2O75167 634 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 FAM86B2P0C5J1 330 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 SREBF1P36956 1147 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 FKBP1AP62942 108 aaKnown RBP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 USH1GQ495M9 461 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 HSP90B2PQ58FF3 399 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 SYDE2Q5VT97 1194 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 HAUS3Q68CZ6 603 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 TMEM179Q6ZVK1 233 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 EPM2AIP1Q7L775 607 aaPredicted RBP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 FBXO11Q86XK2 927 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 RNF10Q8N5U6 811 aaKnown RBP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 GMCL1Q96IK5 515 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 SELENOOQ9BVL4 669 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 RPA1P27694 616 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 RBM5P52756 815 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 HDLBPQ00341 1268 aaKnown RBP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 SYT2Q8N9I0 419 aaPredicted RBP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 HINFPQ9BQA5 517 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 REEP2Q9BRK0 252 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 QTRT2Q9H974 415 aaKnown RBP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 DMGDHQ9UI17 866 aaKnown RBP16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 VAV3Q9UKW4 847 aa16.76■□□□□ 0.27
SPIRE1-201ENST00000309836 CETN3O15182 167 aa16.75■□□□□ 0.27
SPIRE1-201ENST00000309836 ECE2O60344 883 aa16.75■□□□□ 0.27
SPIRE1-201ENST00000309836 RNF40O75150 1001 aa16.75■□□□□ 0.27
SPIRE1-201ENST00000309836 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
SPIRE1-201ENST00000309836 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms