RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 SFR1Q86XK3 245 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 CCDC170Q8IYT3 715 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 UBXN6Q9BZV1 441 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 NT5C3AQ9H0P0 336 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
SYVN1-202ENST00000307289 MYH10P35580 1976 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 BUB1O43683 1085 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 IPO7O95373 1038 aaKnown RBP18.16■□□□□ 0.5
SYVN1-202ENST00000307289 CFBP00751 764 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 KIF5AQ12840 1032 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 GIT2Q14161 759 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 HGSNATQ68CP4 663 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 CACNA2D4Q7Z3S7 1137 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 MBOAT7Q96N66 472 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 RUSC1Q9BVN2 902 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 LSM14BQ9BX40 385 aaKnown RBP18.16■□□□□ 0.5
SYVN1-202ENST00000307289 BHMT2Q9H2M3 363 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.16■□□□□ 0.5
SYVN1-202ENST00000307289 RAB21Q9UL25 225 aa18.16■□□□□ 0.5
SYVN1-202ENST00000307289 RASSF7Q02833 373 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 ADAM9Q13443 819 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 CTTNQ14247 550 aaKnown RBP18.15■□□□□ 0.5
SYVN1-202ENST00000307289 SPA17Q15506 151 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 KCTD19Q17RG1 926 aaPredicted RBP18.15■□□□□ 0.5
SYVN1-202ENST00000307289 PAPD7Q5XG87 772 aaKnown RBP18.15■□□□□ 0.5
SYVN1-202ENST00000307289 KSR1Q8IVT5 923 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 CCDC65Q8IXS2 484 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 PDE11AQ9HCR9 933 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 C2orf54Q08AI8 447 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 NEK11Q8NG66 645 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 SECISBP2LQ93073 1101 aaKnown RBP18.15■□□□□ 0.5
SYVN1-202ENST00000307289 PURBQ96QR8 312 aaKnown RBP18.15■□□□□ 0.5
SYVN1-202ENST00000307289 FBXO28Q9NVF7 368 aa18.15■□□□□ 0.5
SYVN1-202ENST00000307289 KDM3AQ9Y4C1 1321 aa18.14■□□□□ 0.5
SYVN1-202ENST00000307289 HNRNPH3P31942 346 aaKnown RBP18.14■□□□□ 0.5
SYVN1-202ENST00000307289 DNA2P51530 1060 aa18.14■□□□□ 0.5
SYVN1-202ENST00000307289 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.5
SYVN1-202ENST00000307289 PDXDC1Q6P996 788 aa18.14■□□□□ 0.5
SYVN1-202ENST00000307289 GMCL1P1Q8NEA9 526 aa18.14■□□□□ 0.5
SYVN1-202ENST00000307289 WDR18Q9BV38 432 aa18.14■□□□□ 0.5
SYVN1-202ENST00000307289 BRD3Q15059 726 aa18.14■□□□□ 0.49
SYVN1-202ENST00000307289 TDRD12Q587J7 1177 aaKnown RBP18.14■□□□□ 0.49
SYVN1-202ENST00000307289 STYK1Q6J9G0 422 aa18.14■□□□□ 0.49
SYVN1-202ENST00000307289 NFRKBQ6P4R8 1299 aa18.14■□□□□ 0.49
SYVN1-202ENST00000307289 GMCL1Q96IK5 515 aa18.14■□□□□ 0.49
SYVN1-202ENST00000307289 MRIQ9BWK5 157 aa18.14■□□□□ 0.49
SYVN1-202ENST00000307289 VAV3Q9UKW4 847 aa18.14■□□□□ 0.49
SYVN1-202ENST00000307289 SREBF1P36956 1147 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 TMEM39BQ9GZU3 492 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 VEZTQ9HBM0 779 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
SYVN1-202ENST00000307289 L1RE1Q9UN81 338 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.13■□□□□ 0.49
SYVN1-202ENST00000307289 C10orf71Q711Q0 1435 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 MAP2K7O14733 419 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 MYBL2P10244 700 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 NR2F2P24468 414 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 ZNF76P36508 570 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 HDLBPQ00341 1268 aaKnown RBP18.13■□□□□ 0.49
SYVN1-202ENST00000307289 DGKZQ13574 1117 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 TRIM59Q8IWR1 403 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 LRRC27Q9C0I9 530 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 CLIC2O15247 247 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 MATR3P43243 847 aaKnown RBP eCLIP18.13■□□□□ 0.49
SYVN1-202ENST00000307289 CASP4P49662 377 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 CDK17Q00537 523 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 ASTE1Q2TB18 679 aaPredicted RBP18.13■□□□□ 0.49
SYVN1-202ENST00000307289 SLFN12Q8IYM2 578 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 HDAC7Q8WUI4 952 aa18.13■□□□□ 0.49
SYVN1-202ENST00000307289 SHTN1A0MZ66 631 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 LRRIQ3A6PVS8 624 aaPredicted RBP18.12■□□□□ 0.49
SYVN1-202ENST00000307289 FGFR1OPO95684 399 aaKnown RBP18.12■□□□□ 0.49
SYVN1-202ENST00000307289 SLC9A1P19634 815 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 MAGEA1P43355 309 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
SYVN1-202ENST00000307289 AP3B2Q13367 1082 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 CC2D2BQ6DHV5 1058 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 CAGE1Q8TC20 777 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 PACSIN1Q9BY11 444 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 PLEKHA4Q9H4M7 779 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 DNM3Q9UQ16 869 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 ZNF646O15015 1829 aaPredicted RBP18.12■□□□□ 0.49
SYVN1-202ENST00000307289 RPA1P27694 616 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 Q4G0T1 1027 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 FAM133AQ8N9E0 248 aa18.12■□□□□ 0.49
SYVN1-202ENST00000307289 EIF2AK1Q9BQI3 630 aaKnown RBP18.12■□□□□ 0.49
SYVN1-202ENST00000307289 WRAP73Q9P2S5 460 aaPredicted RBP18.12■□□□□ 0.49
SYVN1-202ENST00000307289 FRMD3A2A2Y4 597 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 PHACTR2O75167 634 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 KCNH2Q12809 1159 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 PTPROQ16827 1216 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 TPH2Q8IWU9 490 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 PKD2L1Q9P0L9 805 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 IGLV3-22A0A075B6J6 115 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 USP14P54578 494 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 TUBB2AQ13885 445 aa18.11■□□□□ 0.49
SYVN1-202ENST00000307289 RAPGEF1Q13905 1077 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms