RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GSDMAQ96QA5 445 aa9.05□□□□□ -0.96
PCDHB1-201ENST00000306549 GAS2O43903 313 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 SYNPO2Q9UMS6 1093 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 A0A1W2PQ27 194 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 A0A1W2PQ64 194 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 A0A1W2PQD8 194 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 CMA1P23946 247 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 C8orf74Q6P047 294 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 TMTC1Q8IUR5 882 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 ACCSQ96QU6 501 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 KIAA0391O15091 583 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 PPFIA4O75335 1185 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 GARSP41250 739 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 RAB44Q7Z6P3 723 aaPredicted RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 CCDC124Q96CT7 223 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 DHTKD1Q96HY7 919 aaPredicted RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 SUGCTQ9HAC7 445 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 CPSF3Q9UKF6 684 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 ZHX1Q9UKY1 873 aaPredicted RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 HNRNPDLO14979 420 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 KRT33BQ14525 404 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 ANKRD20A3Q5VUR7 823 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 HDXQ7Z353 690 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 ANGPTL3Q9Y5C1 460 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 SH2B2O14492 632 aaPredicted RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 ZSCAN23Q3MJ62 389 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 RILPQ96NA2 401 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 A0A0G2JLW4 131 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 TNPO2O14787 897 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 KRT15P19012 456 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 PDIA3P30101 505 aaKnown RBP9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 FKBP1BP68106 108 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 MTMR3Q13615 1198 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 RINT1Q6NUQ1 792 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 CHST13Q8NET6 341 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 NUP98P52948 1817 aa9.04□□□□□ -0.96
PCDHB1-201ENST00000306549 MAGEB2O15479 319 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 PCK1P35558 622 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 STX17P56962 302 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 C10orf76Q5T2E6 689 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 SPICE1Q8N0Z3 855 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 NDUFAF2Q8N183 169 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 GRK7Q8WTQ7 553 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 MMS19Q96T76 1030 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 MYH1P12882 1939 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 ZNF157P51786 506 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 PTGDRQ13258 359 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 MTMR1Q13613 665 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 DBN1Q16643 649 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 JADE1Q6IE81 842 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 LARP4BQ92615 738 aaKnown RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 PLIN2Q99541 437 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 CTNND2Q9UQB3 1225 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 ELF1P32519 619 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 TAF1CQ15572 869 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 KCTD1Q719H9 257 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 SLC13A4Q9UKG4 626 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 CLGNO14967 610 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 STAT3P40763 770 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 RYBPQ8N488 228 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 PIK3C2AO00443 1686 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 PYGLP06737 847 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 SH3BGRP55822 239 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 NLRP12P59046 1061 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 MICALL1Q8N3F8 863 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 NLRP7Q8WX94 980 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 KRT12Q99456 494 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 RAB17Q9H0T7 212 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 KCND2Q9NZV8 630 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 MANSC4A6NHS7 340 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 DNAJC8O75937 253 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 SETSIPP0DME0 302 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 FCGRTP55899 365 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 IQCB1Q15051 598 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 BSPRYQ5W0U4 402 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 ARMCX5Q6P1M9 558 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 USP50Q70EL3 339 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 MAEAQ7L5Y9 396 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 THEM5Q8N1Q8 247 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 LCORLQ8N3X6 602 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 FAM84BQ96KN1 310 aaPredicted RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 RUNDC3BQ96NL0 473 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 LSG1Q9H089 658 aaKnown RBP9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 RAB20Q9NX57 234 aa9.03□□□□□ -0.96
PCDHB1-201ENST00000306549 TBC1D8O95759 1140 aa9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 PPARGP37231 505 aaPredicted RBP9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 MROH8Q9H579 483 aa9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 LZTFL1Q9NQ48 299 aa9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 KIAA0100Q14667 2235 aaKnown RBP9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 K7ERI5 159 aa9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 FKBP3Q00688 224 aaKnown RBP9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 SNRNP48Q6IEG0 339 aaKnown RBP9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms