RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 KIF28PB7ZC32 967 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 ATP9AO75110 1047 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 ARHGAP4P98171 946 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 ZNF618Q5T7W0 954 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 RUFY3Q7L099 469 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 SEPT1Q8WYJ6 367 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 GLG1Q92896 1179 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 PHKBQ93100 1093 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 MXRA8Q9BRK3 442 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 SDF4Q9BRK5 362 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 SLC26A6Q9BXS9 759 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 PRDM12Q9H4Q4 367 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 C6orf50Q9HD87 102 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 JPH1Q9HDC5 661 aaPredicted RBP12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 TMEM260Q9NX78 707 aa12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 YBX2Q9Y2T7 364 aaKnown RBP12.41□□□□□ -0.42
HMGN1P35-201ENST00000303758 EMSYQ7Z589 1322 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 RSPH10B2B2RC85 870 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 TREHO43280 583 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 PRPF3O43395 683 aaKnown RBP12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 RSPH10BP0C881 870 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 MARK3P27448 753 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 CCT2P78371 535 aaKnown RBP12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 HIC1Q14526 733 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 TRIM71Q2Q1W2 868 aaKnown RBP12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 JAKMIP3Q5VZ66 844 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 MCTP2Q6DN12 878 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 FBXL16Q8N461 479 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 PHOSPHO2Q8TCD6 241 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 WNT8BQ93098 351 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 RNPEPQ9H4A4 650 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 AZI2Q9H6S1 392 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 SETD4Q9NVD3 440 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 ERAP1Q9NZ08 941 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 SLC9A2Q9UBY0 812 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 MICAL3Q7RTP6 2002 aa12.4□□□□□ -0.42
HMGN1P35-201ENST00000303758 NRCAMQ92823 1304 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CPLX1O14810 134 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 NBNO60934 754 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 EFCAB14O75071 495 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CAND2O75155 1236 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CXCL10P02778 98 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CA3P07451 260 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CTSHP09668 335 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 MYOGP15173 224 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 IGFBP4P22692 258 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 GNA11P29992 359 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 SREBF1P36956 1147 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 PPFIA1Q13136 1202 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 IKBKEQ14164 716 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CEP55Q53EZ4 464 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 TRIM22Q8IYM9 498 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 BICD2Q8TD16 824 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 LMBR1Q8WVP7 490 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 RNF26Q9BY78 433 aaPredicted RBP12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 AGXT2Q9BYV1 514 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 SMARCAD1Q9H4L7 1026 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 KCNH7Q9NS40 1196 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 CHD7Q9P2D1 2997 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 TELO2Q9Y4R8 837 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
HMGN1P35-201ENST00000303758 NFASCO94856 1347 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 ABHD14A-ACY1A0A1B0GW23 586 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 GSTTP1A0A1W2PQM5 241 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 ESYT2A0FGR8 921 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 TLL1O43897 1013 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 LGR5O75473 907 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 IFNAR1P17181 557 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 PDIA3P30101 505 aaKnown RBP12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 HOXC8P31273 242 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 CPLX2Q6PUV4 134 aaKnown RBP12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 TNPO1Q92973 898 aaKnown RBP12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 TM6SF1Q9BZW5 370 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 ZMYND12Q9H0C1 365 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 NCOA5Q9HCD5 579 aaKnown RBP12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 SIP14410 1827 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 TRANK1O15050 2925 aa12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 COL4A4P53420 1690 aaPredicted RBP12.38□□□□□ -0.43
HMGN1P35-201ENST00000303758 A0A0C4DFX4 3053 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 DDX39AO00148 427 aaKnown RBP12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 ARP10275 920 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 IGBP1P78318 339 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 DEFB103AP81534 67 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms