RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DDX42Q86XP3 938 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 PHF21AQ96BD5 680 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 POTEB3A0JP26 581 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 PSMC2P35998 433 aaKnown RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 TFAMQ00059 246 aaKnown RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 GRIN1Q05586 938 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 LLGL1Q15334 1064 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 TRIP13Q15645 432 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 GPR162Q16538 588 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 CERKLQ49MI3 558 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 POTEBQ6S5H4 581 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 PI4K2BQ8TCG2 481 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
CLIP1-201ENST00000302528 DYDC2Q96IM9 177 aa11.18□□□□□ -0.62
CLIP1-201ENST00000302528 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 SGSM2O43147 1006 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ZBED1O96006 694 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 GFAPP14136 432 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 HDAC4P56524 1084 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 RRM2BQ7LG56 351 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ZC3H18Q86VM9 953 aaKnown RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 FAM81BQ96LP2 452 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ASPSCR1Q9BZE9 553 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ACTR5Q9H9F9 607 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 FANCLQ9NW38 375 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 NXF1Q9UBU9 619 aaKnown RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 FLT4P35916 1363 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 USP17L12C9JPN9 530 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 USP17L21D6R901 530 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 MAPK13O15264 365 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 CA4P22748 312 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 COPB1P53618 953 aaKnown RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 MDM2Q00987 491 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ICA1Q05084 483 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 MRPL28Q13084 256 aaKnown RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ZBTB40Q9NUA8 1239 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 PPIP5K1Q6PFW1 1433 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 H0YC42 278 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 DTNBO60941 627 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 MECOMQ03112 1051 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 BTN2A2Q8WVV5 523 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 KIAA1024Q9UPX6 916 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 PI4K2BG5E9Z4 385 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 GOLGA8HP0CJ92 632 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 NR2F2P24468 414 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 CCNA1P78396 465 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 MYO1EQ12965 1108 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 GALNT17Q6IS24 598 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ARMCX2Q7L311 632 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 RABGGTAQ92696 567 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 ULK4Q96C45 1275 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 SLC7A5P2Q9GIP4 190 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 KLC2Q9H0B6 622 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 AOX1Q06278 1338 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 TMEM232C9JQI7 657 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 LRRN2O75325 713 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 APOA1P02647 267 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 VCPP55072 806 aaKnown RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 MXD4Q14582 209 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-201ENST00000302528 TEDDM1Q5T9Z0 273 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 PYROXD1Q8WU10 500 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 CDC23Q9UJX2 597 aa11.17□□□□□ -0.62
CLIP1-201ENST00000302528 RNF103-CHMP3A0A140T963 221 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 M0R2C6 588 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 AFPP02771 609 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 MRPS15P82914 257 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 WDR75Q8IWA0 830 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 SLC35F6Q8N357 371 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 PNMA1Q8ND90 353 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 OTUB1Q96FW1 271 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 ACCSQ96QU6 501 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 PBRM1Q86U86 1689 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 ZMYND10O75800 440 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 UBE3AQ05086 875 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 RWDD4Q6NW29 188 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 KIAA2013Q8IYS2 634 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 OTULINQ96BN8 352 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 TUBGCP2Q9BSJ2 902 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 STRIP2Q9ULQ0 834 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 SATB2Q9UPW6 733 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 NEMP1O14524 444 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 SRGAP2CP0DJJ0 459 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 SCG2P13521 617 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 ZNF18P17022 549 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 AARSP49588 968 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 FSCBQ5H9T9 825 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 C10orf76Q5T2E6 689 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 CATSPER3Q86XQ3 398 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 PDIK1LQ8N165 341 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms