RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CCL23P55773 120 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.355e-7■■■□□ 14.6
CLCC1-201ENST00000302500 MTMR1Q13613 665 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 PTGISQ16647 500 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 MARCH8Q5T0T0 291 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 B3GNT9Q6UX72 402 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 DAGLBQ8NCG7 672 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 RASGRP4Q8TDF6 673 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 MBOAT7Q96N66 472 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 RNPEPQ9H4A4 650 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
CLCC1-201ENST00000302500 AGO4Q9HCK5 861 aaKnown RBP12.88□□□□□ -0.35
CLCC1-201ENST00000302500 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 MYH9P35579 1960 aaKnown RBP12.88□□□□□ -0.35
CLCC1-201ENST00000302500 STK36Q9NRP7 1315 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 NBNO60934 754 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 DTNBO60941 627 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 CKBP12277 381 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 ME3Q16798 604 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 PSRC1Q6PGN9 363 aaPredicted RBP12.88□□□□□ -0.35
CLCC1-201ENST00000302500 NLRX1Q86UT6 975 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 CAGE1Q8TC20 777 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 CDHR1Q96JP9 859 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 SLC26A6Q9BXS9 759 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
CLCC1-201ENST00000302500 MBLAC1A4D2B0 266 aaPredicted RBP12.87□□□□□ -0.35
CLCC1-201ENST00000302500 SMIM10L2AP0DMW4 78 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 SMIM10L2BP0DMW5 78 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 TCF7P36402 384 aaPredicted RBP12.87□□□□□ -0.35
CLCC1-201ENST00000302500 PTK7Q13308 1070 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
CLCC1-201ENST00000302500 GIMAP8Q8ND71 665 aaPredicted RBP12.87□□□□□ -0.35
CLCC1-201ENST00000302500 AFAP1L1Q8TED9 768 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 LMBR1Q8WVP7 490 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
CLCC1-201ENST00000302500 MLXIPQ9HAP2 919 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 GJB4Q9NTQ9 266 aa12.87□□□□□ -0.35
CLCC1-201ENST00000302500 GRXCR1A8MXD5 290 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 ZBTB42B2RXF5 422 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 TREHO43280 583 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 DEXIO95424 95 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 PFKMP08237 780 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 ATP4AP20648 1035 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 RFC2P35250 354 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 PBX2P40425 430 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 FAM47CQ5HY64 1035 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 ABHD15Q6UXT9 468 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 REXO1Q8N1G1 1221 aaKnown RBP12.86□□□□□ -0.35
CLCC1-201ENST00000302500 GTF3C6Q969F1 213 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 PHF20Q9BVI0 1012 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 PBX4Q9BYU1 374 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 MYO9BQ13459 2157 aa12.86□□□□□ -0.35
CLCC1-201ENST00000302500 EVPLQ92817 2033 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 TMEM265A0A087WTH1 108 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 CYP3A7-CYP3A51PA0A087WV96 503 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 SELPP16109 830 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 CYP3A7P24462 503 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 RBM25P49756 843 aaKnown RBP12.85□□□□□ -0.35
CLCC1-201ENST00000302500 ACTR2P61160 394 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 FGD1P98174 961 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 MGAT3Q09327 533 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 FAM26DQ5JW98 314 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 LRRC8DQ7L1W4 858 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 DEFB123Q8N688 67 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 C7orf31Q8N865 590 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 NSUN7Q8NE18 718 aaKnown RBP12.85□□□□□ -0.35
CLCC1-201ENST00000302500 SEPT1Q8WYJ6 367 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 C6orf50Q9HD87 102 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 JPH1Q9HDC5 661 aaPredicted RBP12.85□□□□□ -0.35
CLCC1-201ENST00000302500 PCDHA4Q9UN74 947 aa12.85□□□□□ -0.35
CLCC1-201ENST00000302500 YBX2Q9Y2T7 364 aaKnown RBP12.85□□□□□ -0.35
CLCC1-201ENST00000302500 ARHGEF15O94989 841 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 DNAJB2P25686 324 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 GNA11P29992 359 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 STK3Q13188 491 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
CLCC1-201ENST00000302500 MCTP2Q6DN12 878 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 OTOP2Q7RTS6 562 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 CCDC60Q8IWA6 550 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-201ENST00000302500 CCDC12Q8WUD4 166 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-201ENST00000302500 SEMA6BQ9H3T3 888 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 SLC9A2Q9UBY0 812 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 NAP1L2Q9ULW6 460 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-201ENST00000302500 ATG2AQ2TAZ0 1938 aa12.84□□□□□ -0.35
CLCC1-201ENST00000302500 COL4A4P53420 1690 aaPredicted RBP12.83□□□□□ -0.36
CLCC1-201ENST00000302500 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.83□□□□□ -0.36
CLCC1-201ENST00000302500 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.83□□□□□ -0.36
CLCC1-201ENST00000302500 FGBP02675 491 aa12.83□□□□□ -0.36
CLCC1-201ENST00000302500 USP11P51784 963 aa12.83□□□□□ -0.36
CLCC1-201ENST00000302500 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms