RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.13
HIF3A-204ENST00000300862 PLEKHA4Q9H4M7 779 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 KCNMB3Q9NPA1 279 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 DMGDHQ9UI17 866 aaKnown RBP14.23□□□□□ -0.13
HIF3A-204ENST00000300862 ABCB11O95342 1321 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 LCA5LO95447 670 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 HOXA13P31271 388 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-204ENST00000300862 ARHGAP4P98171 946 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 CYP4A11Q02928 519 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 ADAM9Q13443 819 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 CCNI2Q6ZMN8 369 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-204ENST00000300862 CATSPER3Q86XQ3 398 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 CYP2W1Q8TAV3 490 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 IQCDQ96DY2 449 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 MS4A14Q96JA4 679 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 KCTD10Q9H3F6 313 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 FAM198AQ9UFP1 575 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 HPCAL4Q9UM19 191 aa14.23□□□□□ -0.13
HIF3A-204ENST00000300862 KDM3AQ9Y4C1 1321 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 LTBP1Q14766 1721 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 ONECUT3O60422 494 aaPredicted RBP14.22□□□□□ -0.13
HIF3A-204ENST00000300862 RPS6KA5O75582 802 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 ACTN1P12814 892 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 NOP2P46087 812 aaKnown RBP14.22□□□□□ -0.13
HIF3A-204ENST00000300862 RAPGEF1Q13905 1077 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SLC27A3Q5K4L6 730 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 HYIQ5T013 277 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SFMBT2Q5VUG0 894 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.22□□□□□ -0.13
HIF3A-204ENST00000300862 DNAAF5Q86Y56 855 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SPATA4Q8NEY3 305 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 RPGRIP1Q96KN7 1286 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SYF2O95926 243 aaKnown RBP14.22□□□□□ -0.13
HIF3A-204ENST00000300862 NPR1P16066 1061 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SLC12A3P55017 1021 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 JAG1P78504 1218 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 ICA1Q05084 483 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 TBC1D5Q92609 795 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 CCDC17Q96LX7 622 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 ALS2CR12Q96Q35 445 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 SELENOOQ9BVL4 669 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 TLR10Q9BXR5 811 aa14.22□□□□□ -0.13
HIF3A-204ENST00000300862 MYO3BQ8WXR4 1341 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 TARSL2A2RTX5 802 aaKnown RBP14.21□□□□□ -0.13
HIF3A-204ENST00000300862 FAM86B1E9PN63 330 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 F5H6K3 240 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 RNF40O75150 1001 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 IVLP07476 585 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 FAM86B2P0C5J1 330 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 KLRC3Q07444 240 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 SLC9C1Q4G0N8 1177 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 PACSIN1Q9BY11 444 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 DHX36Q9H2U1 1008 aaKnown RBP14.21□□□□□ -0.13
HIF3A-204ENST00000300862 FAM204AQ9H8W3 233 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 CEP72Q9P209 647 aa14.21□□□□□ -0.13
HIF3A-204ENST00000300862 ARFGEF1Q9Y6D6 1849 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 RSPH10B2B2RC85 870 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 FTCDO95954 541 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 RSPH10BP0C881 870 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 NR2F2P24468 414 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 USP11P51784 963 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 SPIRE1Q08AE8 756 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 MAP9Q49MG5 647 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 CCDC181Q5TID7 509 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 KLHDC7AQ5VTJ3 777 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 COL23A1Q86Y22 540 aaPredicted RBP14.21□□□□□ -0.14
HIF3A-204ENST00000300862 FAM71BQ8TC56 605 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 ZDHHC15Q96MV8 337 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 EFCC1Q9HA90 598 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 ADAMTS1Q9UHI8 967 aa14.21□□□□□ -0.14
HIF3A-204ENST00000300862 PACSIN2Q9UNF0 486 aaPredicted RBP14.21□□□□□ -0.14
HIF3A-204ENST00000300862 A0A087X0T9 212 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 PRPF6O94906 941 aaKnown RBP14.2□□□□□ -0.14
HIF3A-204ENST00000300862 MMP10P09238 476 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 FAM228BP0C875 321 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 GGCXP38435 758 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 EPS15P42566 896 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 RNASE9P60153 205 aaKnown RBP14.2□□□□□ -0.14
HIF3A-204ENST00000300862 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 SFR1Q86XK3 245 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 ETNPPLQ8TBG4 499 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 CEP63Q96MT8 703 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 EHD4Q9H223 541 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 IKZF4Q9H2S9 585 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 PI4KBQ9UBF8 816 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 TRPC5Q9UL62 973 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-204ENST00000300862 HYOU1Q9Y4L1 999 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 ZC3H4Q9UPT8 1303 aaKnown RBP14.2□□□□□ -0.14
HIF3A-204ENST00000300862 NDUFB10O96000 172 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 SPATA31C1P0DKV0 1188 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 MYBP10242 640 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 MCM3P25205 808 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 KLRC1P26715 233 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms