RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 EEPD1Q7L9B9 569 aa23.21■■□□□ 1.31
PACSIN3-201ENST00000298838 SENP7Q9BQF6 1050 aa23.21■■□□□ 1.31
PACSIN3-201ENST00000298838 WDR64B1ANS9 1081 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 MUTP22033 750 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 DPYDQ12882 1025 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 STX1AQ16623 288 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 NT5DC1Q5TFE4 455 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 ZNF746Q6NUN9 644 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 KCNV1Q6PIU1 500 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 SV2BQ7L1I2 683 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 KCNK18Q7Z418 384 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 RGL1Q9NZL6 768 aa23.2■■□□□ 1.3
PACSIN3-201ENST00000298838 DOCK3Q8IZD9 2030 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 GOLGA6L3A6NEY3 463 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 MORN1Q5T089 497 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 GIMAP8Q8ND71 665 aaPredicted RBP23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 RDM1Q8NG50 284 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 SPATA20Q8TB22 786 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 DYDC2Q96IM9 177 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 MAML3Q96JK9 1138 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 ANO10Q9NW15 660 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 MGAMO43451 1857 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 BIN1O00499 593 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 SLITRK3O94933 977 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 MAP2K2P36507 400 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 SP2Q02086 613 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 MAP2K5Q13163 448 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 MAMDC4Q6UXC1 1216 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 TPH2Q8IWU9 490 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 FBXO16Q8IX29 292 aaPredicted RBP23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 SMAP1Q8IYB5 467 aaPredicted RBP23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 BLZF1Q9H2G9 400 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 SLC9A2Q9UBY0 812 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 DNM3Q9UQ16 869 aa23.19■■□□□ 1.3
PACSIN3-201ENST00000298838 TNPO2O14787 897 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 CCNE2O96020 404 aa23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 UBA1P22314 1058 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 CASP1P29466 404 aa23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 CUL4BQ13620 913 aa23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 CTTNQ14247 550 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 MCM6Q14566 821 aa23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 SOCS4Q8WXH5 440 aa23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 GSDMAQ96QA5 445 aa23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 LRRC27Q9C0I9 530 aa23.18■■□□□ 1.3
PACSIN3-201ENST00000298838 FSD2A1L4K1 749 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 E9PMD0 336 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 P4HBP07237 508 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 SARSP49591 514 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 NEDD9Q14511 834 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 DHX8Q14562 1220 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 TRIML1Q8N9V2 468 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 LXNQ9BS40 222 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 LOXHD1Q8IVV2 1947 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 VEGFBP49765 207 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 ANO6Q4KMQ2 910 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 MSL3Q8N5Y2 521 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 BANK1Q8NDB2 785 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 TRIM9Q9C026 710 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 VTA1Q9NP79 307 aa23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.17■■□□□ 1.3
PACSIN3-201ENST00000298838 CAVIN2O95810 425 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 PLA2G4BP0C869 781 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 NLRP12P59046 1061 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 CYFIP1Q7L576 1253 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 NPLOC4Q8TAT6 608 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 SCFD2Q8WU76 684 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 MAN1B1Q9UKM7 699 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 PCDHA10Q9Y5I2 948 aa23.16■■□□□ 1.3
PACSIN3-201ENST00000298838 THSD7BQ9C0I4 1608 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 SYNGAP1Q96PV0 1343 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 A0A087WWV3 80 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 HOXC6P09630 235 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 NACC1Q96RE7 527 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 C7orf25Q9BPX7 421 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 TINF2Q9BSI4 451 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 ZSWIM4Q9H7M6 989 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 RMND1Q9NWS8 449 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 DDX41Q9UJV9 622 aaKnown RBP23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 WDR81Q562E7 1941 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 FARP2O94887 1054 aaPredicted RBP23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 SSBP05455 408 aaKnown RBP eCLIP23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 RGS2P41220 211 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 QARSP47897 775 aaKnown RBP23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 FCGRTP55899 365 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 PSMC6P62333 389 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 HTRA3P83110 453 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 LACTBP83111 547 aaPredicted RBP23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 SP4Q02446 784 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 TTLL4Q14679 1199 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 CFHR5Q9BXR6 569 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 DNAJC25Q9H1X3 360 aa23.15■■□□□ 1.3
PACSIN3-201ENST00000298838 SORBS3O60504 671 aa23.14■■□□□ 1.29
PACSIN3-201ENST00000298838 RPN1P04843 607 aaKnown RBP23.14■■□□□ 1.29
PACSIN3-201ENST00000298838 PSAPP07602 524 aa23.14■■□□□ 1.29
PACSIN3-201ENST00000298838 ACTR2P61160 394 aa23.14■■□□□ 1.29
PACSIN3-201ENST00000298838 DPCR1Q3MIW9 517 aa23.14■■□□□ 1.29
PACSIN3-201ENST00000298838 ISM2Q6H9L7 571 aa23.14■■□□□ 1.29
PACSIN3-201ENST00000298838 USP6NLQ92738 828 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms