RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 LARP4BQ92615 738 aaKnown RBP27.59■■■□□ 2.01
GTF2A1-201ENST00000298173 CASP1P29466 404 aa27.59■■■□□ 2.01
GTF2A1-201ENST00000298173 MAP2K2P36507 400 aa27.59■■■□□ 2.01
GTF2A1-201ENST00000298173 ZNF746Q6NUN9 644 aaPredicted RBP27.59■■■□□ 2.01
GTF2A1-201ENST00000298173 ARMCX2Q7L311 632 aa27.59■■■□□ 2.01
GTF2A1-201ENST00000298173 MIER3Q7Z3K6 550 aa27.59■■■□□ 2.01
GTF2A1-201ENST00000298173 USP6NLQ92738 828 aa27.59■■■□□ 2.01
GTF2A1-201ENST00000298173 MGAMO43451 1857 aa27.58■■■□□ 2.01
GTF2A1-201ENST00000298173 CUL4BQ13620 913 aa27.58■■■□□ 2.01
GTF2A1-201ENST00000298173 DYDC2Q96IM9 177 aa27.58■■■□□ 2.01
GTF2A1-201ENST00000298173 MAML3Q96JK9 1138 aa27.58■■■□□ 2.01
GTF2A1-201ENST00000298173 CFHR5Q9BXR6 569 aa27.58■■■□□ 2.01
GTF2A1-201ENST00000298173 WDR81Q562E7 1941 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 POTEFA5A3E0 1075 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 SFNP31947 248 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 CYP4A11Q02928 519 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 MAP2K5Q13163 448 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 MCM6Q14566 821 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 KCNV1Q6PIU1 500 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 POTEGQ6S5H5 508 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 SV2BQ7L1I2 683 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 EEPD1Q7L9B9 569 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 RDM1Q8NG50 284 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 NPLOC4Q8TAT6 608 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 NEK9Q8TD19 979 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 SMARCE1Q969G3 411 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 C7orf25Q9BPX7 421 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 GJD2Q9UKL4 321 aa27.57■■■□□ 2
GTF2A1-201ENST00000298173 E9PMD0 336 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 HOXC6P09630 235 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 CTGFP29279 349 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 VEGFBP49765 207 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 JAK3P52333 1124 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 PSMC6P62333 389 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 CTTNQ14247 550 aaKnown RBP27.56■■■□□ 2
GTF2A1-201ENST00000298173 GSDMAQ96QA5 445 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 BLZF1Q9H2G9 400 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 DDX41Q9UJV9 622 aaKnown RBP27.56■■■□□ 2
GTF2A1-201ENST00000298173 A0A087WWV3 80 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 SMC2O95347 1197 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 P4HBP07237 508 aaKnown RBP27.56■■■□□ 2
GTF2A1-201ENST00000298173 AMPD3Q01432 767 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 KATNBL1Q9H079 304 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 JPH1Q9HDC5 661 aaPredicted RBP27.56■■■□□ 2
GTF2A1-201ENST00000298173 SLC5A4Q9NY91 659 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 SLC9A2Q9UBY0 812 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 MAN1B1Q9UKM7 699 aa27.56■■■□□ 2
GTF2A1-201ENST00000298173 WDR64B1ANS9 1081 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 SNAI1O95863 264 aaPredicted RBP27.55■■■□□ 2
GTF2A1-201ENST00000298173 NLRP12P59046 1061 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 CNNM4Q6P4Q7 775 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 CCDC62Q6P9F0 684 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 TPH2Q8IWU9 490 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 SMAP1Q8IYB5 467 aaPredicted RBP27.55■■■□□ 2
GTF2A1-201ENST00000298173 MSL3Q8N5Y2 521 aaKnown RBP27.55■■■□□ 2
GTF2A1-201ENST00000298173 GIMAP8Q8ND71 665 aaPredicted RBP27.55■■■□□ 2
GTF2A1-201ENST00000298173 TRIM9Q9C026 710 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 RBSNQ9H1K0 784 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 WRAP73Q9P2S5 460 aaPredicted RBP27.55■■■□□ 2
GTF2A1-201ENST00000298173 DNM3Q9UQ16 869 aa27.55■■■□□ 2
GTF2A1-201ENST00000298173 BIN1O00499 593 aa27.54■■■□□ 2
GTF2A1-201ENST00000298173 BMP6P22004 513 aa27.54■■■□□ 2
GTF2A1-201ENST00000298173 UBA1P22314 1058 aaKnown RBP27.54■■■□□ 2
GTF2A1-201ENST00000298173 NEDD9Q14511 834 aa27.54■■■□□ 2
GTF2A1-201ENST00000298173 STX1AQ16623 288 aa27.54■■■□□ 2
GTF2A1-201ENST00000298173 FBXO16Q8IX29 292 aaPredicted RBP27.54■■■□□ 2
GTF2A1-201ENST00000298173 TRIML1Q8N9V2 468 aa27.54■■■□□ 2
GTF2A1-201ENST00000298173 ANO10Q9NW15 660 aa27.54■■■□□ 2
GTF2A1-201ENST00000298173 PCDHA10Q9Y5I2 948 aa27.54■■■□□ 2
GTF2A1-201ENST00000298173 RBM47A0AV96 593 aaKnown RBP27.53■■■□□ 2
GTF2A1-201ENST00000298173 ATG7O95352 703 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 ARIH2O95376 493 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 PLA2G4BP0C869 781 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 HTRA3P83110 453 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 MORC3Q14149 939 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 TAPT1Q6NXT6 567 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 CYFIP1Q7L576 1253 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 TINF2Q9BSI4 451 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 VTA1Q9NP79 307 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.53■■■□□ 2
GTF2A1-201ENST00000298173 TELO2Q9Y4R8 837 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 SYNGAP1Q96PV0 1343 aa27.53■■■□□ 2
GTF2A1-201ENST00000298173 GOLGA6L3A6NEY3 463 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 MYMKA6NI61 221 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 KLRC4O43908 158 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 LYPLA2O95372 231 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 SLC12A3P55017 1021 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 ANO6Q4KMQ2 910 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 SYT2Q8N9I0 419 aaPredicted RBP27.52■■■□□ 2
GTF2A1-201ENST00000298173 LXNQ9BS40 222 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 TCEAL9Q9UHQ7 104 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 SAMM50Q9Y512 469 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 FARP2O94887 1054 aaPredicted RBP27.52■■■□□ 2
GTF2A1-201ENST00000298173 EYA4O95677 639 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 QARSP47897 775 aaKnown RBP27.52■■■□□ 2
GTF2A1-201ENST00000298173 LY6KQ17RY6 165 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 ABHD15Q6UXT9 468 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 BANK1Q8NDB2 785 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 NACC1Q96RE7 527 aa27.52■■■□□ 2
GTF2A1-201ENST00000298173 LRRC27Q9C0I9 530 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms