RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 KIF5BP33176 963 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 UTP14CQ5TAP6 766 aaKnown RBP18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 PTCRAQ6ISU1 281 aaPredicted RBP18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 RPAINQ86UA6 219 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 TMEM192Q8IY95 271 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 ZNF654Q8IZM8 581 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 GJD3Q8N144 294 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 CTCFLQ8NI51 663 aaPredicted RBP18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 NEK9Q8TD19 979 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 CUL5Q93034 780 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 RRP36Q96EU6 259 aaKnown RBP18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 MYL10Q9BUA6 226 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 LY9Q9HBG7 655 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 RALGAPA2Q2PPJ7 1873 aa18.41■□□□□ 0.54
TMEM41A-201ENST00000296254 NLRC5Q86WI3 1866 aa18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 FAM86C2PA6NEL3 165 aa18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 GPM6BQ13491 265 aa18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 COL19A1Q14993 1142 aa18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 TAF2Q6P1X5 1199 aa18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 NLRX1Q86UT6 975 aa18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 GIMAP8Q8ND71 665 aaPredicted RBP18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 BANK1Q8NDB2 785 aa18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 SEC63Q9UGP8 760 aaKnown RBP18.4■□□□□ 0.54
TMEM41A-201ENST00000296254 C5orf42Q9H799 3197 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 GRXCR2A6NFK2 248 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 CHRNA1P02708 482 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 KCNA2P16389 499 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 SMARCA1P28370 1054 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 TCF7P36402 384 aaPredicted RBP18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 PUS10Q3MIT2 529 aaKnown RBP18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 GPRASP2Q96D09 838 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 PABPC5Q96DU9 382 aaKnown RBP18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 LZTS2Q9BRK4 669 aa18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 NSUN3Q9H649 340 aaKnown RBP18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
TMEM41A-201ENST00000296254 H3BQ06 376 aaPredicted RBP18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 PLEKHA8P1O95397 391 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 LINC00271P0C7V0 271 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 GHRP10912 638 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 MGAT3Q09327 533 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 CDHR1Q96JP9 859 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 MTA3Q9BTC8 594 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 RC3H2Q9HBD1 1191 aaKnown RBP18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 ADGRA3Q8IWK6 1321 aa18.38■□□□□ 0.53
TMEM41A-201ENST00000296254 C5orf67F2Z3F1 127 aa18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 ATP9AO75110 1047 aa18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 ITGB5P18084 799 aa18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 SSTR3P32745 418 aaPredicted RBP18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 CTNNB1P35222 781 aa18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 SRBD1Q8N5C6 995 aaKnown RBP18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 IL17RAQ96F46 866 aa18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 ERAP1Q9NZ08 941 aa18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 TUBE1Q9UJT0 475 aa18.37■□□□□ 0.53
TMEM41A-201ENST00000296254 MBLAC1A4D2B0 266 aaPredicted RBP18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 SH2B2O14492 632 aaPredicted RBP18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 PRC1O43663 620 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 MARK3P27448 753 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 GNAQP50148 359 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 LPIN1Q14693 890 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 GRIK4Q16099 956 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 ATG2AQ2TAZ0 1938 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 FIBCD1Q8N539 461 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 PSTPIP2Q9H939 334 aa18.36■□□□□ 0.53
TMEM41A-201ENST00000296254 GSTTP1A0A1W2PQM5 241 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 MTMR1Q13613 665 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 FBXO47Q5MNV8 452 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 RSPH3Q86UC2 560 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 SEPT1Q8WYJ6 367 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 CLP1Q92989 425 aaKnown RBP18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 C11orf84Q9BUA3 381 aaPredicted RBP18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 RWDD3Q9Y3V2 267 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 UBIAD1Q9Y5Z9 338 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 MUC6Q6W4X9 2439 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 MYO7AQ13402 2215 aa18.35■□□□□ 0.53
TMEM41A-201ENST00000296254 WDFY4Q6ZS81 3184 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 KAT6AQ92794 2004 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 PRR33A8MZF0 331 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 RB1P06400 928 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 RXRAP19793 462 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 COL9A3Q14050 684 aaPredicted RBP18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 UBE2SQ16763 222 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 MARCH8Q5T0T0 291 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 NFXL1Q6ZNB6 911 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 TSHZ1Q6ZSZ6 1077 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 TMTC2Q8N394 836 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 GLG1Q92896 1179 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 LMAN2LQ9H0V9 348 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 FAM50BQ9Y247 325 aa18.34■□□□□ 0.53
TMEM41A-201ENST00000296254 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms