RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 ABCD1P33897 745 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 MED21Q13503 144 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 TAF12Q16514 161 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 LINC00854A0A1B0GVQ3 168 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 DSG1Q02413 1049 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 MUM1L1Q5H9M0 696 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 ST13P5Q8NFI4 369 aaPredicted RBP12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 OR9Q1Q8NGQ5 310 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 LDHCP07864 332 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 HSPD1P10809 573 aaKnown RBP12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 TNNI1P19237 187 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 VSNL1P62760 191 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 SCRN1Q12765 414 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 ANKRD7Q92527 254 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 TAGAPQ8N103 731 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 CDC26Q8NHZ8 85 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 DNM3Q9UQ16 869 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 AURKCQ9UQB9 309 aa12.63□□□□□ -0.39
SHROOM3-201ENST00000296043 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 LRRC8EQ6NSJ5 796 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 FAM180AQ6UWF9 173 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 NAF1Q96HR8 494 aaKnown RBP12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 GYS1P13807 737 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 INAQ16352 499 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 Q4G0T1 1027 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 LUZP2Q86TE4 346 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 TMEM191CA6NGB0 347 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 PI4K2BG5E9Z4 385 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 PALMO75781 387 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 TMEM191BP0C7N4 346 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 PLOD1Q02809 727 aaPredicted RBP12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 IQCB1Q15051 598 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 C4orf50Q6ZRC1 276 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 PCGF5Q86SE9 256 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 CCPG1Q9ULG6 757 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 KCTD21Q4G0X4 260 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 RGL1Q9NZL6 768 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 ATP6V1E2Q96A05 226 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 NCK2O43639 380 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 TRIM67Q6ZTA4 783 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 ATP6V0A4Q9HBG4 840 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 PTPRGP23470 1445 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 KIF11P52732 1056 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 MPP4Q96JB8 637 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 SEC16BQ96JE7 1060 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 PRKG1Q13976 671 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 ACAD11Q709F0 780 aa12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 NR1H4Q96RI1 486 aaPredicted RBP12.62□□□□□ -0.39
SHROOM3-201ENST00000296043 GOLGA8SH3BPF8 625 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 GOLGA8MH3BSY2 632 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 MFAP3LO75121 409 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 SH3BP5LQ7L8J4 393 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 MAN1B1Q9UKM7 699 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 GFPT2O94808 682 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 FBLN1P23142 703 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 GINM1Q9NU53 330 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 SNX24Q9Y343 169 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 M0R3G1 203 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 ITGB3BPQ13352 177 aaPredicted RBP12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 CATSPER2Q96P56 530 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 PRPF18Q99633 342 aaKnown RBP12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 KRT1P04264 644 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 OLA1Q9NTK5 396 aaKnown RBP12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 SPDYE16A6NNV3 312 aaPredicted RBP12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 CYLDQ9NQC7 956 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 MAPKBP1O60336 1514 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 NFIBO00712 420 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 UBE4BO95155 1302 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 MYL7Q01449 175 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 SFR1Q86XK3 245 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 MAPK4P31152 587 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 LRRC8BQ6P9F7 803 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 IQANK1A0A1B0GTG1 560 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 TAF4O00268 1085 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 COPEO14579 308 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 PYROXD1Q8WU10 500 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 C1orf112Q9NSG2 853 aa12.61□□□□□ -0.39
SHROOM3-201ENST00000296043 LSP1P33241 339 aa12.6□□□□□ -0.39
SHROOM3-201ENST00000296043 TRPM8Q7Z2W7 1104 aa12.6□□□□□ -0.39
SHROOM3-201ENST00000296043 NPHS2Q9NP85 383 aa12.6□□□□□ -0.39
SHROOM3-201ENST00000296043 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
SHROOM3-201ENST00000296043 N4BP1O75113 896 aaKnown RBP12.6□□□□□ -0.39
SHROOM3-201ENST00000296043 TRIP10Q15642 601 aa12.6□□□□□ -0.39
SHROOM3-201ENST00000296043 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms