RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 POU3F3P20264 500 aaPredicted RBP28.94■■■□□ 2.22
U2AF1-201ENST00000291552 TCF7P36402 384 aaPredicted RBP28.94■■■□□ 2.22
U2AF1-201ENST00000291552 IKBKEQ14164 716 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.94■■■□□ 2.22
U2AF1-201ENST00000291552 MICALL1Q8N3F8 863 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 DBF4BQ8NFT6 615 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 KCNB2Q92953 911 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 PKD2L1Q9P0L9 805 aa28.94■■■□□ 2.22
U2AF1-201ENST00000291552 ZNF215Q9UL58 517 aaPredicted RBP28.94■■■□□ 2.22
U2AF1-201ENST00000291552 KLF18A0A0U1RQI7 1052 aa28.93■■■□□ 2.22
U2AF1-201ENST00000291552 CDC27P30260 824 aa28.93■■■□□ 2.22
U2AF1-201ENST00000291552 PLEKHG4Q58EX7 1191 aa28.93■■■□□ 2.22
U2AF1-201ENST00000291552 GIMAP8Q8ND71 665 aaPredicted RBP28.93■■■□□ 2.22
U2AF1-201ENST00000291552 CDHR1Q96JP9 859 aa28.93■■■□□ 2.22
U2AF1-201ENST00000291552 JADE2Q9NQC1 790 aa28.93■■■□□ 2.22
U2AF1-201ENST00000291552 TCF20Q9UGU0 1960 aaKnown RBP28.93■■■□□ 2.22
U2AF1-201ENST00000291552 GOLGA8AA7E2F4 631 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 GOLGA8BA8MQT2 603 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 STXBP3O00186 592 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 LPXNO60711 386 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 EFCAB14O75071 495 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 CAND2O75155 1236 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 NAPAP54920 295 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 ARHGAP4P98171 946 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 MTMR1Q13613 665 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 KRT32Q14532 448 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 PPP1R18Q6NYC8 613 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 PGBD1Q96JS3 809 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 RIC8AQ9NPQ8 531 aa28.92■■■□□ 2.22
U2AF1-201ENST00000291552 GRB10Q13322 594 aa28.91■■■□□ 2.22
U2AF1-201ENST00000291552 ATXN2LQ8WWM7 1075 aaKnown RBP28.91■■■□□ 2.22
U2AF1-201ENST00000291552 RAD9AQ99638 391 aa28.91■■■□□ 2.22
U2AF1-201ENST00000291552 ZBED2Q9BTP6 218 aa28.91■■■□□ 2.22
U2AF1-201ENST00000291552 V9GY48 417 aaPredicted RBP28.91■■■□□ 2.22
U2AF1-201ENST00000291552 LOXHD1Q8IVV2 1947 aa28.9■■■□□ 2.22
U2AF1-201ENST00000291552 FAM117BQ6P1L5 589 aa28.9■■■□□ 2.22
U2AF1-201ENST00000291552 RUFY4Q6ZNE9 571 aa28.9■■■□□ 2.22
U2AF1-201ENST00000291552 NLRC5Q86WI3 1866 aa28.9■■■□□ 2.22
U2AF1-201ENST00000291552 CYP2W1Q8TAV3 490 aa28.9■■■□□ 2.22
U2AF1-201ENST00000291552 SYMPKQ92797 1274 aaKnown RBP28.9■■■□□ 2.22
U2AF1-201ENST00000291552 BDP1A6H8Y1 2624 aa28.9■■■□□ 2.22
U2AF1-201ENST00000291552 GNAT1P11488 350 aa28.89■■■□□ 2.22
U2AF1-201ENST00000291552 SEPT1Q8WYJ6 367 aa28.89■■■□□ 2.22
U2AF1-201ENST00000291552 ASB2Q96Q27 587 aa28.89■■■□□ 2.22
U2AF1-201ENST00000291552 PCYT2Q99447 389 aa28.89■■■□□ 2.22
U2AF1-201ENST00000291552 LINC01553A4QN01 128 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 MARK3P27448 753 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 ADCY7P51828 1080 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 RCAN1P53805 252 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 FAM26DQ5JW98 314 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 GDPD5Q8WTR4 605 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 MXRA8Q9BRK3 442 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 ANO3Q9BYT9 981 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 TMEM260Q9NX78 707 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 BARHL2Q9NY43 387 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 SNX14Q9Y5W7 946 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 NRCAMQ92823 1304 aa28.88■■■□□ 2.21
U2AF1-201ENST00000291552 hCG_1984214I3L0E3 225 aa28.87■■■□□ 2.21
U2AF1-201ENST00000291552 GTPBP6O43824 516 aaPredicted RBP28.87■■■□□ 2.21
U2AF1-201ENST00000291552 HSPA4P34932 840 aa28.87■■■□□ 2.21
U2AF1-201ENST00000291552 CLK2P49760 499 aaKnown RBP28.87■■■□□ 2.21
U2AF1-201ENST00000291552 APOBRQ0VD83 1088 aa28.87■■■□□ 2.21
U2AF1-201ENST00000291552 ZNF713Q8N859 430 aaPredicted RBP28.87■■■□□ 2.21
U2AF1-201ENST00000291552 EHMT1Q9H9B1 1298 aa28.87■■■□□ 2.21
U2AF1-201ENST00000291552 KCNH7Q9NS40 1196 aa28.87■■■□□ 2.21
U2AF1-201ENST00000291552 NID2Q14112 1375 aa28.87■■■□□ 2.21
U2AF1-201ENST00000291552 HMGB1P09429 215 aaKnown RBP28.86■■■□□ 2.21
U2AF1-201ENST00000291552 ARP10275 920 aa28.86■■■□□ 2.21
U2AF1-201ENST00000291552 ADD1P35611 737 aaKnown RBP28.86■■■□□ 2.21
U2AF1-201ENST00000291552 MRPS5P82675 430 aaKnown RBP28.86■■■□□ 2.21
U2AF1-201ENST00000291552 PPFIA1Q13136 1202 aa28.86■■■□□ 2.21
U2AF1-201ENST00000291552 TEX2Q8IWB9 1127 aa28.86■■■□□ 2.21
U2AF1-201ENST00000291552 MYOCDQ8IZQ8 938 aa28.86■■■□□ 2.21
U2AF1-201ENST00000291552 SEPT8Q92599 483 aa28.86■■■□□ 2.21
U2AF1-201ENST00000291552 JAKMIP1Q96N16 626 aaKnown RBP28.86■■■□□ 2.21
U2AF1-201ENST00000291552 COL4A6Q14031 1691 aa28.86■■■□□ 2.21
U2AF1-201ENST00000291552 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-201ENST00000291552 SMCO2A6NFE2 343 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 ADAMTS3O15072 1205 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 MAFGO15525 162 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 CHRNA1P02708 482 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 AMHP03971 560 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 ERVK-21P61565 698 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 HTRA4P83105 476 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-201ENST00000291552 ITGB3BPQ13352 177 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-201ENST00000291552 GRIK4Q16099 956 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 MARCH8Q5T0T0 291 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 Q6ZUG5 572 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 JPH1Q9HDC5 661 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-201ENST00000291552 ERAP1Q9NZ08 941 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 MTUS1Q9ULD2 1270 aa28.85■■■□□ 2.21
U2AF1-201ENST00000291552 WDR81Q562E7 1941 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 MBLAC1A4D2B0 266 aaPredicted RBP28.84■■■□□ 2.21
U2AF1-201ENST00000291552 FOSP01100 380 aaPredicted RBP28.84■■■□□ 2.21
U2AF1-201ENST00000291552 SREBF1P36956 1147 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 METAP2P50579 478 aaKnown RBP eCLIP28.84■■■□□ 2.21
U2AF1-201ENST00000291552 TFF2Q03403 129 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 MGAT3Q09327 533 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 RPAINQ86UA6 219 aa28.84■■■□□ 2.21
U2AF1-201ENST00000291552 SP7Q8TDD2 431 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms