RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 RNPEPQ9H4A4 650 aa23.31■■□□□ 1.32
RAB28-201ENST00000288723 STK36Q9NRP7 1315 aa23.3■■□□□ 1.32
RAB28-201ENST00000288723 NIPA1Q7RTP0 329 aa23.3■■□□□ 1.32
RAB28-201ENST00000288723 SETD4Q9NVD3 440 aa23.3■■□□□ 1.32
RAB28-201ENST00000288723 ZNF215Q9UL58 517 aaPredicted RBP23.3■■□□□ 1.32
RAB28-201ENST00000288723 NFASCO94856 1347 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 C17orf102A2RUQ5 167 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 IQCF3P0C7M6 154 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 FDPSP14324 419 aaKnown RBP23.29■■□□□ 1.32
RAB28-201ENST00000288723 MARK3P27448 753 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 BFSP2Q13515 415 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 PRR16Q569H4 304 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 M0R2N6 131 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 PITPNM1O00562 1244 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 ACTR2P61160 394 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 ST3GAL1Q11201 340 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 OTOP2Q7RTS6 562 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 TBCKQ8TEA7 893 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 GLG1Q92896 1179 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 PHF20Q9BVI0 1012 aa23.29■■□□□ 1.32
RAB28-201ENST00000288723 TREHO43280 583 aa23.28■■□□□ 1.32
RAB28-201ENST00000288723 JAK2O60674 1132 aa23.28■■□□□ 1.32
RAB28-201ENST00000288723 FGBP02675 491 aa23.28■■□□□ 1.32
RAB28-201ENST00000288723 PTK7Q13308 1070 aa23.28■■□□□ 1.32
RAB28-201ENST00000288723 PSRC1Q6PGN9 363 aaPredicted RBP23.28■■□□□ 1.32
RAB28-201ENST00000288723 NSUN7Q8NE18 718 aaKnown RBP23.28■■□□□ 1.32
RAB28-201ENST00000288723 ATP6V0A1Q93050 837 aa23.28■■□□□ 1.32
RAB28-201ENST00000288723 PCYT2Q99447 389 aa23.28■■□□□ 1.32
RAB28-201ENST00000288723 ZNF577Q9BSK1 485 aa23.28■■□□□ 1.32
RAB28-201ENST00000288723 IPO5O00410 1097 aaKnown RBP23.27■■□□□ 1.32
RAB28-201ENST00000288723 CCNE2O96020 404 aa23.27■■□□□ 1.32
RAB28-201ENST00000288723 CIITAP33076 1130 aa23.27■■□□□ 1.32
RAB28-201ENST00000288723 RBM25P49756 843 aaKnown RBP23.27■■□□□ 1.32
RAB28-201ENST00000288723 RPUSD2Q8IZ73 545 aaKnown RBP23.27■■□□□ 1.32
RAB28-201ENST00000288723 DAGLBQ8NCG7 672 aa23.27■■□□□ 1.32
RAB28-201ENST00000288723 CAGE1Q8TC20 777 aa23.27■■□□□ 1.32
RAB28-201ENST00000288723 CXXC1Q9P0U4 656 aaPredicted RBP23.27■■□□□ 1.32
RAB28-201ENST00000288723 LIMCH1Q9UPQ0 1083 aa23.27■■□□□ 1.32
RAB28-201ENST00000288723 DHX15O43143 795 aaKnown RBP23.26■■□□□ 1.31
RAB28-201ENST00000288723 CKBP12277 381 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 HOXC8P31273 242 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 FAM109BQ6ICB4 259 aaPredicted RBP23.26■■□□□ 1.31
RAB28-201ENST00000288723 Q7L0L9 218 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 CCDC155Q8N6L0 562 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 TRIP12Q14669 1992 aaPredicted RBP23.26■■□□□ 1.31
RAB28-201ENST00000288723 TRIM71Q2Q1W2 868 aaKnown RBP23.26■■□□□ 1.31
RAB28-201ENST00000288723 GALNT17Q6IS24 598 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 SERINC5Q86VE9 423 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 OXER1Q8TDS5 423 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 LENG9Q96B70 501 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 SMARCAD1Q9H4L7 1026 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 ERAP1Q9NZ08 941 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 SCN5AQ14524 2016 aa23.26■■□□□ 1.31
RAB28-201ENST00000288723 XBP1P17861 261 aa23.25■■□□□ 1.31
RAB28-201ENST00000288723 USP11P51784 963 aa23.25■■□□□ 1.31
RAB28-201ENST00000288723 FOSBP53539 338 aa23.25■■□□□ 1.31
RAB28-201ENST00000288723 SETQ01105 290 aaPredicted RBP23.25■■□□□ 1.31
RAB28-201ENST00000288723 LRRC8DQ7L1W4 858 aa23.25■■□□□ 1.31
RAB28-201ENST00000288723 FAM177A1Q8N128 213 aaPredicted RBP23.25■■□□□ 1.31
RAB28-201ENST00000288723 AFAP1L1Q8TED9 768 aa23.25■■□□□ 1.31
RAB28-201ENST00000288723 LMBR1Q8WVP7 490 aa23.25■■□□□ 1.31
RAB28-201ENST00000288723 LGR5O75473 907 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 SELPP16109 830 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 GPNMBQ14956 572 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 ZNF618Q5T7W0 954 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 RASIP1Q5U651 963 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 CCDC83Q8IWF9 413 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 HERVK_113Q902F9 699 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 WASF1Q92558 559 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 AZI2Q9H6S1 392 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 EMSYQ7Z589 1322 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 GRXCR1A8MXD5 290 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 TDP2O95551 362 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 INF2Q27J81 1249 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 GJA10Q969M2 543 aa23.24■■□□□ 1.31
RAB28-201ENST00000288723 FTOQ9C0B1 505 aaKnown RBP eCLIP23.24■■□□□ 1.31
RAB28-201ENST00000288723 ATG7O95352 703 aa23.23■■□□□ 1.31
RAB28-201ENST00000288723 THPOP40225 353 aa23.23■■□□□ 1.31
RAB28-201ENST00000288723 RBL2Q08999 1139 aa23.23■■□□□ 1.31
RAB28-201ENST00000288723 NONOQ15233 471 aaKnown RBP eCLIP23.23■■□□□ 1.31
RAB28-201ENST00000288723 DEFB123Q8N688 67 aa23.23■■□□□ 1.31
RAB28-201ENST00000288723 MSH4O15457 936 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 GNAT1P11488 350 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 RFC2P35250 354 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 STAT5BP51692 787 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 ADAM17P78536 824 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 SMAD3P84022 425 aaKnown RBP23.22■■□□□ 1.31
RAB28-201ENST00000288723 PPFIA1Q13136 1202 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 TRAF7Q6Q0C0 670 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 ABHD15Q6UXT9 468 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 KRT25Q7Z3Z0 450 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 ZBTB10Q96DT7 871 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 TBC1D22BQ9NU19 505 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 NRCAMQ92823 1304 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.22■■□□□ 1.31
RAB28-201ENST00000288723 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.22■■□□□ 1.31
RAB28-201ENST00000288723 ZBBXA8MT70 800 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 IGBP1P78318 339 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 GPR153Q6NV75 609 aa23.22■■□□□ 1.31
RAB28-201ENST00000288723 FAM161BQ96MY7 647 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms