RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TRIM29Q14134 588 aa28.55■■■□□ 2.16
PDF-201ENST00000288022 LLPHQ9BRT6 129 aaKnown RBP28.55■■■□□ 2.16
PDF-201ENST00000288022 BACH2Q9BYV9 841 aa28.55■■■□□ 2.16
PDF-201ENST00000288022 BRMS1Q9HCU9 246 aa28.55■■■□□ 2.16
PDF-201ENST00000288022 CSF2RAP15509 400 aa28.54■■■□□ 2.16
PDF-201ENST00000288022 PPIGQ13427 754 aaKnown RBP eCLIP28.54■■■□□ 2.16
PDF-201ENST00000288022 GLG1Q92896 1179 aa28.54■■■□□ 2.16
PDF-201ENST00000288022 SMIM10L2AP0DMW4 78 aa28.53■■■□□ 2.16
PDF-201ENST00000288022 SMIM10L2BP0DMW5 78 aa28.53■■■□□ 2.16
PDF-201ENST00000288022 KRT2P35908 639 aa28.53■■■□□ 2.16
PDF-201ENST00000288022 ACTR2P61160 394 aa28.53■■■□□ 2.16
PDF-201ENST00000288022 INF2Q27J81 1249 aa28.53■■■□□ 2.16
PDF-201ENST00000288022 OXER1Q8TDS5 423 aa28.53■■■□□ 2.16
PDF-201ENST00000288022 TCEAL9Q9UHQ7 104 aa28.53■■■□□ 2.16
PDF-201ENST00000288022 C17orf102A2RUQ5 167 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 EPHB4P54760 987 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 SHHQ15465 462 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 CCDC155Q8N6L0 562 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 RETREG2Q8NC44 543 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 IL27Q8NEV9 243 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 SMARCAD1Q9H4L7 1026 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 AZI2Q9H6S1 392 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 TBC1D22BQ9NU19 505 aa28.52■■■□□ 2.16
PDF-201ENST00000288022 EDIL3O43854 480 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 MARK3P27448 753 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 ZNF200P98182 395 aaPredicted RBP28.51■■■□□ 2.15
PDF-201ENST00000288022 BFSP2Q13515 415 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 C9orf50Q5SZB4 431 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 PIK3AP1Q6ZUJ8 805 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 LENG9Q96B70 501 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 WNT8AQ9H1J5 351 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 ERAP1Q9NZ08 941 aa28.51■■■□□ 2.15
PDF-201ENST00000288022 EMSYQ7Z589 1322 aa28.5■■■□□ 2.15
PDF-201ENST00000288022 TDP2O95551 362 aa28.5■■■□□ 2.15
PDF-201ENST00000288022 KRT40Q6A162 431 aa28.5■■■□□ 2.15
PDF-201ENST00000288022 SCLYQ96I15 445 aa28.5■■■□□ 2.15
PDF-201ENST00000288022 CTAGE1Q96RT6 745 aa28.5■■■□□ 2.15
PDF-201ENST00000288022 PITPNM1O00562 1244 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 DHX15O43143 795 aaKnown RBP28.49■■■□□ 2.15
PDF-201ENST00000288022 CCNE2O96020 404 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 MMP1P03956 469 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 HMGN5P82970 282 aaKnown RBP28.49■■■□□ 2.15
PDF-201ENST00000288022 HIC1Q14526 733 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 LETM2Q2VYF4 491 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 FAM184AQ8NB25 1140 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 ATP6V0A1Q93050 837 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 RNPEPQ9H4A4 650 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 SETD4Q9NVD3 440 aa28.49■■■□□ 2.15
PDF-201ENST00000288022 MSH4O15457 936 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 LGR5O75473 907 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 ACRP10323 421 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 GNAT1P11488 350 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 FXR1P51114 621 aaKnown RBP eCLIP28.48■■■□□ 2.15
PDF-201ENST00000288022 NR5A1Q13285 461 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 PTK7Q13308 1070 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 NEK8Q86SG6 692 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 CAGE1Q8TC20 777 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 PCYT2Q99447 389 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 IL23AQ9NPF7 189 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 TRIOBPQ9H2D6 2365 aa28.48■■■□□ 2.15
PDF-201ENST00000288022 BACH1O14867 736 aa28.47■■■□□ 2.15
PDF-201ENST00000288022 CD2BP2O95400 341 aaKnown RBP28.47■■■□□ 2.15
PDF-201ENST00000288022 GUCY1B3Q02153 619 aa28.47■■■□□ 2.15
PDF-201ENST00000288022 Q4G0T1 1027 aa28.47■■■□□ 2.15
PDF-201ENST00000288022 MOXD1Q6UVY6 613 aa28.47■■■□□ 2.15
PDF-201ENST00000288022 DIS3L2Q8IYB7 885 aaKnown RBP28.47■■■□□ 2.15
PDF-201ENST00000288022 DHX38Q92620 1227 aaKnown RBP28.47■■■□□ 2.15
PDF-201ENST00000288022 C8orf76Q96K31 380 aa28.47■■■□□ 2.15
PDF-201ENST00000288022 RNPC3Q96LT9 517 aaKnown RBP28.47■■■□□ 2.15
PDF-201ENST00000288022 DDX25Q9UHL0 483 aaKnown RBP28.47■■■□□ 2.15
PDF-201ENST00000288022 CYP3A7-CYP3A51PA0A087WV96 503 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 GAS7O60861 476 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 ATG7O95352 703 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 CYP3A7P24462 503 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 MCM2P49736 904 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 STAT5BP51692 787 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 KRT76Q01546 638 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 ZNF746Q6NUN9 644 aaPredicted RBP28.46■■■□□ 2.15
PDF-201ENST00000288022 MIS18BP1Q6P0N0 1132 aa28.46■■■□□ 2.15
PDF-201ENST00000288022 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.46■■■□□ 2.154e-10■□□□□ 10.9
PDF-201ENST00000288022 BTBD18B2RXH4 712 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 TREHO43280 583 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 IQCF3P0C7M6 154 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 PPFIA1Q13136 1202 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 SAFBQ15424 915 aaKnown RBP eCLIP28.45■■■□□ 2.14
PDF-201ENST00000288022 LRIT3Q3SXY7 679 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 EARS2Q5JPH6 523 aaKnown RBP28.45■■■□□ 2.14
PDF-201ENST00000288022 LRCH2Q5VUJ6 765 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 FAM160B1Q5W0V3 765 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 PSRC1Q6PGN9 363 aaPredicted RBP28.45■■■□□ 2.14
PDF-201ENST00000288022 ABHD15Q6UXT9 468 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 C16orf59Q7L2K0 433 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 RPUSD2Q8IZ73 545 aaKnown RBP28.45■■■□□ 2.14
PDF-201ENST00000288022 AFAP1L1Q8TED9 768 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 TMX3Q96JJ7 454 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 TRPC6Q9Y210 931 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 SAMM50Q9Y512 469 aa28.45■■■□□ 2.14
PDF-201ENST00000288022 NRCAMQ92823 1304 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 FAM205CA6NFA0 338 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 CCNT1O60563 726 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms