RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 PCDHA4Q9UN74 947 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 ATP2C2O75185 946 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 TMOD1P28289 359 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 SF3A3Q12874 501 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCLT1-201ENST00000281142 ITGB3BPQ13352 177 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-201ENST00000281142 GPR162Q16538 588 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 FIGNQ5HY92 759 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 RCSD1Q6JBY9 416 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 PODNQ7Z5L7 613 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 ATP6V1G3Q96LB4 118 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 LRRC4CQ9HCJ2 640 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 RAD51CO43502 376 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 LCA5LO95447 670 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 PDHBP11177 359 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 TNFRSF8P28908 595 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 GTF2IP78347 998 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 CFAP221Q4G0U5 840 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 DYMQ7RTS9 669 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 VCPKMTQ9H867 229 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 KLC4Q9NSK0 619 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCLT1-201ENST00000281142 MYH1P12882 1939 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 BICDL2A1A5D9 508 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 M0R2N6 131 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 ARID5AQ03989 594 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 EHHADHQ08426 723 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 PAK2Q13177 524 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 NEDD9Q14511 834 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 LRRC41Q15345 812 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 ASTE1Q2TB18 679 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-201ENST00000281142 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 HEATR3Q7Z4Q2 680 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 N4BP2L2Q92802 583 aaPredicted RBP12.48□□□□□ -0.41
SCLT1-201ENST00000281142 NOX5Q96PH1 765 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 MXD3Q9BW11 206 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 SLC40A1Q9NP59 571 aa12.48□□□□□ -0.41
SCLT1-201ENST00000281142 TLR2O60603 784 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
SCLT1-201ENST00000281142 KLRC1P26715 233 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 TECP42680 631 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 GRIK5Q16478 980 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 FAM114A1Q8IWE2 563 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 TSPY2A6NKD2 308 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 LETM2Q2VYF4 491 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 RUBCNQ92622 972 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 CYFIP2Q96F07 1278 aa12.47□□□□□ -0.41
SCLT1-201ENST00000281142 TACO1Q9BSH4 297 aaKnown RBP12.47□□□□□ -0.41
SCLT1-201ENST00000281142 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCLT1-201ENST00000281142 ATXN2Q99700 1313 aaKnown RBP12.46□□□□□ -0.41
SCLT1-201ENST00000281142 DNM1LO00429 736 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 PPP1R12AO14974 1030 aaPredicted RBP12.46□□□□□ -0.41
SCLT1-201ENST00000281142 PJA2O43164 708 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 CYTH3O43739 400 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 RASSF9O75901 435 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 PRDX5P30044 214 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 PDXDC1Q6P996 788 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 MMTAG2Q9BU76 263 aaKnown RBP12.46□□□□□ -0.41
SCLT1-201ENST00000281142 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 NEUROG2Q9H2A3 272 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 MAST2Q6P0Q8 1798 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 DCDC2CA8MYV0 355 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 OPLAHO14841 1288 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 FGRP09769 529 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 GOLGA8HP0CJ92 632 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 PAX7P23759 505 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 CALML3P27482 149 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 ERVK-9P63128 1117 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 KCNMA1Q12791 1236 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.413e-6■■□□□ 14.5
SCLT1-201ENST00000281142 UAP1Q16222 522 aaPredicted RBP12.46□□□□□ -0.41
SCLT1-201ENST00000281142 C6orf89Q6UWU4 347 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 FAM228AQ86W67 206 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 CERS5Q8N5B7 392 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 SGSM3Q96HU1 749 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
SCLT1-201ENST00000281142 RAD17O75943 681 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 FAM107AO95990 144 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 LMNB1P20700 586 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 FLT3P36888 993 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 PREPLQ4J6C6 727 aaPredicted RBP12.46□□□□□ -0.42
SCLT1-201ENST00000281142 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 CENPPQ6IPU0 288 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 CEP120Q8N960 986 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 WDR66Q8TBY9 1149 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.42
SCLT1-201ENST00000281142 HAUS2Q9NVX0 235 aa12.46□□□□□ -0.42
SCLT1-201ENST00000281142 CNOT8Q9UFF9 292 aaKnown RBP12.46□□□□□ -0.42
SCLT1-201ENST00000281142 CHUKO15111 745 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 CCNT1O60563 726 aaKnown RBP12.45□□□□□ -0.42
SCLT1-201ENST00000281142 ECHS1P30084 290 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms