RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CHMP2AO43633 222 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 KIF20AO95235 890 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 KRT9P35527 623 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 NOL9Q5SY16 702 aaKnown RBP10.64□□□□□ -0.71
TRIM55-201ENST00000276573 PCNX4Q63HM2 1172 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 RAD9BQ6WBX8 426 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 LRRC55Q6ZSA7 311 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 TOGARAM2Q6ZUX3 1019 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 TMTC1Q8IUR5 882 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 IL31RAQ8NI17 732 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 KIF18AQ8NI77 898 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 SCFD1Q8WVM8 642 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 TEKT3Q9BXF9 490 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 UNC45AQ9H3U1 944 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 ZHX3Q9H4I2 956 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 ABHD10Q9NUJ1 306 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 CAPN11Q9UMQ6 739 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 ADAMTS5Q9UNA0 930 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 DOCK1Q14185 1865 aa10.64□□□□□ -0.71
TRIM55-201ENST00000276573 TTC26A0AVF1 554 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 SOWAHDA6NJG2 315 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 RASSF10A6NK89 507 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 NKRFO15226 690 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 USP2O75604 605 aaPredicted RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 DDNO94850 711 aaPredicted RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 DSG3P32926 999 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 HMGCS2P54868 508 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 ETF1P62495 437 aaKnown RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 RPS6P62753 249 aaKnown RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 MRPS9P82933 396 aaKnown RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 FKBP3Q00688 224 aaKnown RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 COG2Q14746 738 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 MTF1Q14872 753 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 VWA3BQ502W6 1294 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 RINT1Q6NUQ1 792 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 TRIM65Q6PJ69 517 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 REPS2Q8NFH8 660 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 PIGOQ8TEQ8 1089 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 ERGIC2Q96RQ1 377 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 REEP2Q9BRK0 252 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 NUP58Q9BVL2 599 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 KCTD10Q9H3F6 313 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 KCNH7Q9NS40 1196 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 DICER1Q9UPY3 1922 aaKnown RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 FRMPD4Q14CM0 1322 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 GOLGA6L9A6NEM1 432 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 TRAF5O00463 557 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 DHX15O43143 795 aaKnown RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 SYCP1Q15431 976 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 FKBP15Q5T1M5 1219 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 SYT10Q6XYQ8 523 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 CATSPERGQ6ZRH7 1159 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 NELFCDQ8IXH7 590 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 RETREG2Q8NC44 543 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 OR8K1Q8NGG5 319 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 NACC1Q96RE7 527 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 RUSC1Q9BVN2 902 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 NDST4Q9H3R1 872 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 JADE2Q9NQC1 790 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 LUC7L2Q9Y383 392 aaKnown RBP10.63□□□□□ -0.71
TRIM55-201ENST00000276573 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 RIPK3Q9Y572 518 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 ADGRG1Q9Y653 693 aa10.63□□□□□ -0.71
TRIM55-201ENST00000276573 GOLGB1Q14789 3259 aaKnown RBP10.62□□□□□ -0.71
TRIM55-201ENST00000276573 ZBTB39O15060 712 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 OAZ1P54368 228 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 MAN2A1Q16706 1144 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 CYP26C1Q6V0L0 522 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 RNF207Q6ZRF8 634 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 C1orf186Q6ZWK4 172 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 EPM2AIP1Q7L775 607 aaPredicted RBP10.62□□□□□ -0.71
TRIM55-201ENST00000276573 SFR1Q86XK3 245 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRIM55-201ENST00000276573 CEP63Q96MT8 703 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 AGO4Q9HCK5 861 aaKnown RBP10.62□□□□□ -0.71
TRIM55-201ENST00000276573 ADARB2Q9NS39 739 aaKnown RBP10.62□□□□□ -0.71
TRIM55-201ENST00000276573 TMOD4Q9NZQ9 345 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
TRIM55-201ENST00000276573 COL4A3BPQ9Y5P4 624 aa10.62□□□□□ -0.71
TRIM55-201ENST00000276573 SSC5DA1L4H1 1573 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 RSPH10B2B2RC85 870 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 CCDC175P0C221 793 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 RSPH10BP0C881 870 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 GAP43P17677 238 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 EIF2AK2P19525 551 aaKnown RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 KLK7P49862 253 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 ERVK-24P63145 666 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 MAP3K9P80192 1104 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PRKG1Q13976 671 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 BAATQ14032 418 aaPredicted RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 PGM5Q15124 567 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 FIGNQ5HY92 759 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 SH3D19Q5HYK7 790 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 NSMFQ6X4W1 530 aa10.61□□□□□ -0.71
TRIM55-201ENST00000276573 ZC3H3Q8IXZ2 948 aaKnown RBP10.61□□□□□ -0.71
TRIM55-201ENST00000276573 NEK9Q8TD19 979 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms