RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ALX1Q15699 326 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 PDXDC1Q6P996 788 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 ECT2Q9H8V3 914 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 ZMYND8Q9ULU4 1186 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 IQSEC3Q9UPP2 1182 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 ABCC12Q96J65 1359 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 MYH4Q9Y623 1939 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 SPATA31A1Q5TZJ5 1347 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 CFAP73A6NFT4 308 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 SPDYE3A6NKU9 549 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 ASAP2O43150 1006 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 ZBTB48P10074 688 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 CCNE1P24864 410 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 PAPOLAP51003 745 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 TNNC1P63316 161 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 IFI35P80217 286 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 DHX9Q08211 1270 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 CUL1Q13616 776 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 NAB2Q15742 525 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 DDB1Q16531 1140 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 TRIM68Q6AZZ1 485 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 ANO7Q6IWH7 933 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 SYNE4Q8N205 404 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 RNF10Q8N5U6 811 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 SCFD2Q8WU76 684 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 LRRC45Q96CN5 670 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 SLC4A9Q96Q91 983 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 PRMT1Q99873 361 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 SELENOSQ9BQE4 189 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 PAPOLBQ9NRJ5 636 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 STK38LQ9Y2H1 464 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 CD2APQ9Y5K6 639 aa10.05□□□□□ -0.8
HMGCLL1-201ENST00000274901 COL22A1Q8NFW1 1626 aaPredicted RBP10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 FAM205AQ6ZU69 1335 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 BCORQ6W2J9 1755 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 RBAK-RBAKDNI3L0D1 243 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 KCNK3O14649 394 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 CCND1P24385 295 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 PRPHP41219 470 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 CCDC57Q2TAC2 916 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 GALNTL6Q49A17 601 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 VWA3BQ502W6 1294 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 CCDC178Q5BJE1 867 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 LCORLQ8N3X6 602 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 KIAA0895Q8NCT3 520 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 CENPTQ96BT3 561 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 DHTKD1Q96HY7 919 aaPredicted RBP10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 KRT23Q9C075 422 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 TMEM60Q9H2L4 133 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 NLRC4Q9NPP4 1024 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 KBTBD4Q9NVX7 518 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 AMACRQ9UHK6 382 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 TNKSO95271 1327 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 TTI1O43156 1089 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 PRPF3O43395 683 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 IFNAR2P48551 515 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 TAF11Q15544 211 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 TDRD12Q587J7 1177 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 MAGEB6Q8N7X4 407 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 ANKS4BQ8N8V4 417 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 DRAXINQ8NBI3 349 aaPredicted RBP10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 SLC17A8Q8NDX2 589 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 RASGRP4Q8TDF6 673 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 NAF1Q96HR8 494 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 SYT15Q9BQS2 421 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 CNNM2Q9H8M5 875 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
HMGCLL1-201ENST00000274901 TNS2Q63HR2 1409 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 SMIM23A6NLE4 172 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 OAS1P00973 400 aaKnown RBP10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 MMP13P45452 471 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 KCNMA1Q12791 1236 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 PLS1Q14651 629 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 SLMAPQ14BN4 828 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 ENAHQ8N8S7 591 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 PHC3Q8NDX5 983 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 ATP8B4Q8TF62 1192 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 TRIM51Q9BSJ1 452 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 TXLNGYQ9BZA5 131 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 ATP8A1Q9Y2Q0 1164 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 ZBTB12Q9Y330 459 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
HMGCLL1-201ENST00000274901 A0A087X0T9 212 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 CEP104O60308 925 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 LGR5O75473 907 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 NOL4O94818 638 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 FAM228BP0C875 321 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 NEFHP12036 1026 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 ATP2A2P16615 1042 aaKnown RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 SSR1P43307 286 aaKnown RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 CCNG1P51959 295 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 RNASELQ05823 741 aaKnown RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 PDE4DQ08499 809 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms