RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 NECAB2Q7Z6G3 386 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 CCDC84Q86UT8 332 aaPredicted RBP11.75□□□□□ -0.53
LRTM1-201ENST00000273286 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 ZDHHC13Q8IUH4 622 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 TGFBRAP1Q8WUH2 860 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 FAM83CQ9BQN1 747 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
LRTM1-201ENST00000273286 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.75□□□□□ -0.53
LRTM1-201ENST00000273286 HIF3AQ9Y2N7 669 aa11.75□□□□□ -0.53
LRTM1-201ENST00000273286 NOP58Q9Y2X3 529 aaKnown RBP11.75□□□□□ -0.53
LRTM1-201ENST00000273286 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
LRTM1-201ENST00000273286 DOCK3Q8IZD9 2030 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 FOCADQ5VW36 1801 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 A0A1W2PP55 124 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 MAPK4P31152 587 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 ARHGAP4P98171 946 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 GSTM4Q03013 218 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 PDE3AQ14432 1141 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 MAPKAPK5Q8IW41 473 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 TMPRSS13Q9BYE2 586 aa11.74□□□□□ -0.53
LRTM1-201ENST00000273286 HERVK_113P62684 666 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 CCNJLQ8IV13 435 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
LRTM1-201ENST00000273286 EHD4Q9H223 541 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 PRO3102Q9H379 93 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 LIN7BQ9HAP6 207 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 GJD2Q9UKL4 321 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 ZBTB21Q9ULJ3 1066 aa11.73□□□□□ -0.53
LRTM1-201ENST00000273286 A0A096LPE4 126 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 A0A1W2PPZ6 126 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 COBLO75128 1261 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 USP14P54578 494 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 MAP3K12Q12852 859 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 RRP1BQ14684 758 aaKnown RBP11.72□□□□□ -0.53
LRTM1-201ENST00000273286 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 C12orf50Q8NA57 414 aaPredicted RBP11.72□□□□□ -0.53
LRTM1-201ENST00000273286 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 PAWRQ96IZ0 340 aaKnown RBP11.72□□□□□ -0.53
LRTM1-201ENST00000273286 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 CYP4F12Q9HCS2 524 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 DBNLQ9UJU6 430 aaKnown RBP11.72□□□□□ -0.53
LRTM1-201ENST00000273286 PALD1Q9ULE6 856 aa11.72□□□□□ -0.53
LRTM1-201ENST00000273286 SIPA1L1O43166 1804 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 IDH1O75874 414 aaKnown RBP11.71□□□□□ -0.53
LRTM1-201ENST00000273286 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.53
LRTM1-201ENST00000273286 DLGAP3O95886 979 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 CYP7A1P22680 504 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 CCNA1P78396 465 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 PCDH1Q08174 1060 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
LRTM1-201ENST00000273286 SGO2Q562F6 1265 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 TATDN1Q6P1N9 297 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 ADGRA1Q86SQ6 560 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.53
LRTM1-201ENST00000273286 C12orf42Q96LP6 360 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 TCF12Q99081 682 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 TNNQ9UQP3 1299 aa11.71□□□□□ -0.53
LRTM1-201ENST00000273286 CDK5RAP2Q96SN8 1893 aa11.71□□□□□ -0.54
LRTM1-201ENST00000273286 MED26O95402 600 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 NEFLP07196 543 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 MAP4P27816 1152 aaKnown RBP11.7□□□□□ -0.54
LRTM1-201ENST00000273286 RGS2P41220 211 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 GRIA4P48058 902 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 ERVK-24P63145 666 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 ORC1Q13415 861 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 SPRED3Q2MJR0 410 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 MAP3K21Q5TCX8 1036 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 TRIB2Q92519 343 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 P2RX7Q99572 595 aaKnown RBP11.7□□□□□ -0.54
LRTM1-201ENST00000273286 FEZ1Q99689 392 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
LRTM1-201ENST00000273286 SUGCTQ9HAC7 445 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 OGDHLQ9ULD0 1010 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 RABGAP1Q9Y3P9 1069 aa11.7□□□□□ -0.54
LRTM1-201ENST00000273286 TIAF1O95411 115 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 ZKSCAN1P17029 563 aaPredicted RBP11.69□□□□□ -0.54
LRTM1-201ENST00000273286 BMP8BP34820 402 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
LRTM1-201ENST00000273286 APBA2Q99767 749 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 KIAA1683Q9H0B3 1180 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 CWC22Q9HCG8 908 aaKnown RBP11.69□□□□□ -0.54
LRTM1-201ENST00000273286 CABP5Q9NP86 173 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 PIH1D3Q9NQM4 214 aaKnown RBP11.69□□□□□ -0.54
LRTM1-201ENST00000273286 RBPJLQ9UBG7 517 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 GH2P01242 217 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 CYP2B6P20813 491 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 PLEKHH3Q7Z736 793 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 SHKBP1Q8TBC3 707 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 FAM129BQ96TA1 746 aa11.69□□□□□ -0.54
LRTM1-201ENST00000273286 CCDC8Q9H0W5 538 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms