RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 SV2BQ7L1I2 683 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 TLCD1Q96CP7 247 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 MMTAG2Q9BU76 263 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 LSM14BQ9BX40 385 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 LRRC4CQ9HCJ2 640 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 ADAMTS1Q9UHI8 967 aa16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 ZNF142P52746 1687 aaPredicted RBP16.87■□□□□ 0.29
SCAMP2-201ENST00000268099 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 ARID5AQ03989 594 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 RIPK1Q13546 671 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 GALNT17Q6IS24 598 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 TCP11Q8WWU5 503 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 CALML4Q96GE6 196 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 BATF3Q9NR55 127 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 NOC2LQ9Y3T9 749 aaKnown RBP16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 PVALEFA0A1B0GWK0 134 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 MYMKA6NI61 221 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 TECP42680 631 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 DHX9Q08211 1270 aaKnown RBP16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 RAPGEF1Q13905 1077 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 ZKSCAN8Q15776 578 aaPredicted RBP16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 ZNF317Q96PQ6 595 aaPredicted RBP16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 TSG101Q99816 390 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 TMOD3Q9NYL9 352 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 LAMB1P07942 1786 aa16.86■□□□□ 0.29
SCAMP2-201ENST00000268099 BTNL10A8MVZ5 291 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 SKAP2O75563 359 aaPredicted RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 CLTAP09496 248 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 CCNHP51946 323 aaPredicted RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 KLHL30Q0D2K2 578 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 ENOX2Q16206 610 aaKnown RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 KCTD19Q17RG1 926 aaPredicted RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 TMED8Q6PL24 325 aaPredicted RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 CEP120Q8N960 986 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.85■□□□□ 0.295e-6■□□□□ 8.9
SCAMP2-201ENST00000268099 GOLPH3Q9H4A6 298 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 AMACRQ9UHK6 382 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 C15orf41Q9Y2V0 281 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 SHANK3Q9BYB0 1731 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 TOGARAM1Q9Y4F4 1720 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 CCDC188H7C350 402 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 KRIT1O00522 736 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 CCNT1O60563 726 aaKnown RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 GRIK3Q13003 919 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 ITIH4Q14624 930 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 PNMA8AQ86V59 439 aaPredicted RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 THOC1Q96FV9 657 aaKnown RBP16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 PNMA2Q9UL42 364 aa16.85■□□□□ 0.29
SCAMP2-201ENST00000268099 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 ASAP2O43150 1006 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 CCHCR1Q8TD31 782 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 COL4A3BPQ9Y5P4 624 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 CFAP73A6NFT4 308 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 STXBP3O00186 592 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 ANP32DO95626 131 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 EIF3BP55884 814 aaKnown RBP16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 ASIC2Q16515 512 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 PTPROQ16827 1216 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 C11orf91Q3C1V1 193 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 PIGWQ7Z7B1 504 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 PROM2Q8N271 834 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 METTL13Q8N6R0 699 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 LRRC57Q8N9N7 239 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 SLITRK6Q9H5Y7 841 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 BARHL2Q9NY43 387 aa16.84■□□□□ 0.29
SCAMP2-201ENST00000268099 TTI1O43156 1089 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 CAND2O75155 1236 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 MMEP08473 750 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 ZBTB48P10074 688 aaPredicted RBP16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 ITGA4P13612 1032 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 CHN1P15882 459 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 GRB10Q13322 594 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 LRRC41Q15345 812 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 TBC1D1Q86TI0 1168 aaPredicted RBP16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 SEC14L1Q92503 715 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 RIC8AQ9NPQ8 531 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 AIPL1Q9NZN9 384 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
SCAMP2-201ENST00000268099 IFI16Q16666 785 aaKnown RBP16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 HOOK3Q86VS8 718 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 GLIS3Q8NEA6 775 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 CCDC26Q8TAB7 109 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 FAM114A2Q9NRY5 505 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 L3MBTL1Q9Y468 752 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 COL1A1P02452 1464 aaPredicted RBP16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 PPFIA2O75334 1257 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 FOXR2Q6PJQ5 311 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 BZW1Q7L1Q6 419 aaKnown RBP16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 PNMA1Q8ND90 353 aa16.82■□□□□ 0.28
SCAMP2-201ENST00000268099 LARP4BQ92615 738 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms