RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 SCFD1Q8WVM8 642 aa18.71■□□□□ 0.59
CHKA-201ENST00000265689 NUP58Q9BVL2 599 aa18.71■□□□□ 0.59
CHKA-201ENST00000265689 BRCA2P51587 3418 aa18.71■□□□□ 0.59
CHKA-201ENST00000265689 ABCB11O95342 1321 aa18.71■□□□□ 0.59
CHKA-201ENST00000265689 CHMP2AO43633 222 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
CHKA-201ENST00000265689 LRCH2Q5VUJ6 765 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 OTOP1Q7RTM1 612 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 RETREG2Q8NC44 543 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 REEP2Q9BRK0 252 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 POLD4Q9HCU8 107 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 CCPG1Q9ULG6 757 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 EPN1Q9Y6I3 576 aaPredicted RBP18.7■□□□□ 0.58
CHKA-201ENST00000265689 ZNF536O15090 1300 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 PITPNM2Q9BZ72 1349 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 PSMD10O75832 226 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 TNFAIP1Q13829 316 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 CTTNQ14247 550 aaKnown RBP18.7■□□□□ 0.58
CHKA-201ENST00000265689 PKNOX2Q96KN3 472 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 POLR3CQ9BUI4 534 aaPredicted RBP18.7■□□□□ 0.58
CHKA-201ENST00000265689 BHMT2Q9H2M3 363 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 EMILIN3Q9NT22 766 aa18.7■□□□□ 0.58
CHKA-201ENST00000265689 REXO2Q9Y3B8 237 aaKnown RBP18.7■□□□□ 0.58
CHKA-201ENST00000265689 NDUFA10O95299 355 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 CASP5P51878 434 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 FKBP3Q00688 224 aaKnown RBP18.69■□□□□ 0.58
CHKA-201ENST00000265689 FOXR2Q6PJQ5 311 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 GPC2Q8N158 579 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 SIK3Q9Y2K2 1263 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 STK24Q9Y6E0 443 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 ICAM1P05362 532 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 ARP10275 920 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 ZBED6P86452 979 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 ERCC6LQ2NKX8 1250 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 ARHGAP29Q52LW3 1261 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 CEP55Q53EZ4 464 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 TEX2Q8IWB9 1127 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 SLC5A5Q92911 643 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 RUSC1Q9BVN2 902 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 CARD6Q9BX69 1037 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 KCTD10Q9H3F6 313 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 BCAS3Q9H6U6 928 aa18.69■□□□□ 0.58
CHKA-201ENST00000265689 EPHB6O15197 1021 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 KIF5CO60282 957 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 ARHGAP25P42331 645 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 MEA1Q16626 185 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 ZNF569Q5MCW4 686 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 SFR1Q86XK3 245 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 PIGOQ8TEQ8 1089 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 HOOK2Q96ED9 719 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 DYDC2Q96IM9 177 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 HSD17B14Q9BPX1 270 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 EHMT1Q9H9B1 1298 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 COL4A3BPQ9Y5P4 624 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 RSPH10B2B2RC85 870 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 ADM5C9JUS6 153 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 NFIBO00712 420 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 RSPH10BP0C881 870 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 MAP3K9P80192 1104 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 TPH2Q8IWU9 490 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 CPXCR1Q8N123 301 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 CCDC155Q8N6L0 562 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 PRPF38AQ8NAV1 312 aaKnown RBP18.68■□□□□ 0.58
CHKA-201ENST00000265689 FAM207AQ9NSI2 230 aaPredicted RBP18.68■□□□□ 0.58
CHKA-201ENST00000265689 COL20A1Q9P218 1284 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 RABGAP1Q9Y3P9 1069 aa18.68■□□□□ 0.58
CHKA-201ENST00000265689 WDR46O15213 610 aaKnown RBP18.67■□□□□ 0.58
CHKA-201ENST00000265689 GPR162Q16538 588 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 CCDC40Q4G0X9 1142 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 FIGNQ5HY92 759 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 KIAA1683Q9H0B3 1180 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 A0A1W2PQJ5 194 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 ZBTB39O15060 712 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 GAS7O60861 476 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 SLITRK3O94933 977 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 EYA4O95677 639 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 HSD17B4P51659 736 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 PPP2R5CQ13362 524 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 CLEC4DQ8WXI8 215 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 ZNF577Q9BSK1 485 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 MMRN2Q9H8L6 949 aa18.67■□□□□ 0.58
CHKA-201ENST00000265689 RAVER2Q9HCJ3 691 aaKnown RBP18.67■□□□□ 0.58
CHKA-201ENST00000265689 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
CHKA-201ENST00000265689 MNS1Q8NEH6 495 aa18.66■□□□□ 0.58
CHKA-201ENST00000265689 LPAR1Q92633 364 aa18.66■□□□□ 0.58
CHKA-201ENST00000265689 TRIM10Q9UDY6 481 aa18.66■□□□□ 0.58
CHKA-201ENST00000265689 MRFAP1Q9Y605 127 aa18.66■□□□□ 0.58
CHKA-201ENST00000265689 MTMR2Q13614 643 aa18.66■□□□□ 0.58
CHKA-201ENST00000265689 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
CHKA-201ENST00000265689 HOMER2Q9NSB8 354 aa18.66■□□□□ 0.58
CHKA-201ENST00000265689 ZNHIT6Q9NWK9 470 aaKnown RBP18.66■□□□□ 0.58
CHKA-201ENST00000265689 TFR2Q9UP52 801 aa18.66■□□□□ 0.58
CHKA-201ENST00000265689 MYBP10242 640 aa18.65■□□□□ 0.58
CHKA-201ENST00000265689 ALAS1P13196 640 aa18.65■□□□□ 0.58
CHKA-201ENST00000265689 HERVK_113P62684 666 aa18.65■□□□□ 0.58
CHKA-201ENST00000265689 MOB2Q70IA6 237 aa18.65■□□□□ 0.58
CHKA-201ENST00000265689 SLC35F6Q8N357 371 aa18.65■□□□□ 0.58
CHKA-201ENST00000265689 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
CHKA-201ENST00000265689 CEP63Q96MT8 703 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms