RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MEIS1O00470 390 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 TREHO43280 583 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 NBNO60934 754 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 BAIAP3O94812 1187 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 ARP10275 920 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 GNAT1P11488 350 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 COL6A3P12111 3177 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 AKAP17AQ02040 695 aaKnown RBP18.36■□□□□ 0.53
USE1-201ENST00000263897 JAKMIP3Q5VZ66 844 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 CCDC12Q8WUD4 166 aaPredicted RBP18.36■□□□□ 0.53
USE1-201ENST00000263897 GBF1Q92538 1859 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 RNF26Q9BY78 433 aaPredicted RBP18.36■□□□□ 0.53
USE1-201ENST00000263897 NKX2-4Q9H2Z4 354 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 SLC28A3Q9HAS3 691 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 NCOA5Q9HCD5 579 aaKnown RBP18.36■□□□□ 0.53
USE1-201ENST00000263897 C6orf50Q9HD87 102 aa18.36■□□□□ 0.53
USE1-201ENST00000263897 CENPBP07199 599 aaPredicted RBP18.35■□□□□ 0.53
USE1-201ENST00000263897 FOSL2P15408 326 aa18.35■□□□□ 0.53
USE1-201ENST00000263897 THPOP40225 353 aa18.35■□□□□ 0.53
USE1-201ENST00000263897 ADAM17P78536 824 aa18.35■□□□□ 0.53
USE1-201ENST00000263897 MCTP2Q6DN12 878 aa18.35■□□□□ 0.53
USE1-201ENST00000263897 ZNF274Q96GC6 653 aaPredicted RBP18.35■□□□□ 0.53
USE1-201ENST00000263897 SLC9A7Q96T83 725 aa18.35■□□□□ 0.53
USE1-201ENST00000263897 UPF3BQ9BZI7 483 aaKnown RBP18.35■□□□□ 0.53
USE1-201ENST00000263897 SLC9A2Q9UBY0 812 aa18.35■□□□□ 0.53
USE1-201ENST00000263897 NFASCO94856 1347 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 NRCAMQ92823 1304 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 RSPH10B2B2RC85 870 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 PPFIA3O75145 1194 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 CYP3A4P08684 503 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 RSPH10BP0C881 870 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 MYOGP15173 224 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 GNA11P29992 359 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 ZNF76P36508 570 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 MBTPS1Q14703 1052 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 CNKSR3Q6P9H4 555 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 NIPA1Q7RTP0 329 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 CRYGNQ8WXF5 182 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 SLC26A6Q9BXS9 759 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 SMARCAD1Q9H4L7 1026 aa18.34■□□□□ 0.53
USE1-201ENST00000263897 JPH1Q9HDC5 661 aaPredicted RBP18.34■□□□□ 0.53
USE1-201ENST00000263897 REXO1Q8N1G1 1221 aaKnown RBP18.33■□□□□ 0.52
USE1-201ENST00000263897 MAFAQ8NHW3 353 aaPredicted RBP18.33■□□□□ 0.52
USE1-201ENST00000263897 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
USE1-201ENST00000263897 GLG1Q92896 1179 aa18.33■□□□□ 0.52
USE1-201ENST00000263897 SDF4Q9BRK5 362 aa18.33■□□□□ 0.52
USE1-201ENST00000263897 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
USE1-201ENST00000263897 PRDM12Q9H4Q4 367 aa18.33■□□□□ 0.52
USE1-201ENST00000263897 AGO4Q9HCK5 861 aaKnown RBP18.33■□□□□ 0.52
USE1-201ENST00000263897 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
USE1-201ENST00000263897 ERAP1Q9NZ08 941 aa18.33■□□□□ 0.52
USE1-201ENST00000263897 EMSYQ7Z589 1322 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 ABHD14A-ACY1A0A1B0GW23 586 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 FAM86B1E9PN63 330 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 CAND2O75155 1236 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 LGR5O75473 907 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 FAM86B2P0C5J1 330 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 KCNJ6P48051 423 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 ITGB3BPQ13352 177 aaPredicted RBP18.32■□□□□ 0.52
USE1-201ENST00000263897 IKBKEQ14164 716 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 TCTN1Q2MV58 587 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 PCYT2Q99447 389 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 SH3GLB2Q9NR46 395 aa18.32■□□□□ 0.52
USE1-201ENST00000263897 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
USE1-201ENST00000263897 ATG7O95352 703 aa18.31■□□□□ 0.52
USE1-201ENST00000263897 ACTR2P61160 394 aa18.31■□□□□ 0.52
USE1-201ENST00000263897 WDR5P61964 334 aaKnown RBP18.31■□□□□ 0.52
USE1-201ENST00000263897 SSRP1Q08945 709 aaKnown RBP18.31■□□□□ 0.52
USE1-201ENST00000263897 PLA2G4DQ86XP0 818 aa18.31■□□□□ 0.52
USE1-201ENST00000263897 CCDC148Q8NFR7 591 aa18.31■□□□□ 0.52
USE1-201ENST00000263897 CHD9Q3L8U1 2897 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 IGLV3-22A0A075B6J6 115 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 CPLX1O14810 134 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 EFCAB14O75071 495 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 MARK3P27448 753 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 FAM26DQ5JW98 314 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 PPP2R2DQ66LE6 453 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 PLPPR4Q7Z2D5 763 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 DBF4BQ8NFT6 615 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 GAS2L1Q99501 681 aaPredicted RBP18.3■□□□□ 0.52
USE1-201ENST00000263897 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 VPS54Q9P1Q0 977 aa18.3■□□□□ 0.52
USE1-201ENST00000263897 RBAK-RBAKDNI3L0D1 243 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 DHX15O43143 795 aaKnown RBP18.29■□□□□ 0.52
USE1-201ENST00000263897 CA3P07451 260 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 STAT5BP51692 787 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 ANAPC15P60006 121 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 DEFB103AP81534 67 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 STK3Q13188 491 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 GRIK4Q16099 956 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 PLEKHG4Q58EX7 1191 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 MARCH8Q5T0T0 291 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
USE1-201ENST00000263897 RASGRP4Q8TDF6 673 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms