RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 ARMCX2Q7L311 632 aa25.41■■□□□ 1.66
UFD1-201ENST00000263202 LARP4BQ92615 738 aaKnown RBP25.41■■□□□ 1.66
UFD1-201ENST00000263202 BCAS3Q9H6U6 928 aa25.41■■□□□ 1.66
UFD1-201ENST00000263202 GTPBP6O43824 516 aaPredicted RBP25.4■■□□□ 1.66
UFD1-201ENST00000263202 CCNE2O96020 404 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 SMARCE1Q969G3 411 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 MAML3Q96JK9 1138 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 SENP7Q9BQF6 1050 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 ZSWIM8A7E2V4 1837 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 A0A087WWV3 80 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 TGFB3P10600 412 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 VEGFBP49765 207 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 HTRA3P83110 453 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 CUL4BQ13620 913 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 MCM6Q14566 821 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 ZNF746Q6NUN9 644 aaPredicted RBP25.4■■□□□ 1.66
UFD1-201ENST00000263202 MAMDC4Q6UXC1 1216 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 NPLOC4Q8TAT6 608 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 BLZF1Q9H2G9 400 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 TCEAL9Q9UHQ7 104 aa25.4■■□□□ 1.66
UFD1-201ENST00000263202 LOXHD1Q8IVV2 1947 aa25.39■■□□□ 1.66
UFD1-201ENST00000263202 FSD2A1L4K1 749 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 E9PMD0 336 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 BIN1O00499 593 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 MUTP22033 750 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 MAP2K2P36507 400 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 MAP2K5Q13163 448 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 CTTNQ14247 550 aaKnown RBP25.39■■□□□ 1.65
UFD1-201ENST00000263202 SV2BQ7L1I2 683 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 FBXO16Q8IX29 292 aaPredicted RBP25.39■■□□□ 1.65
UFD1-201ENST00000263202 NEK9Q8TD19 979 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 THSD7BQ9C0I4 1608 aa25.39■■□□□ 1.65
UFD1-201ENST00000263202 SMC2O95347 1197 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 MYL1P05976 194 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 SFNP31947 248 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 JAK3P52333 1124 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 STX1AQ16623 288 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 KCTD17Q8N5Z5 321 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 JPH1Q9HDC5 661 aaPredicted RBP25.38■■□□□ 1.65
UFD1-201ENST00000263202 SLC5A4Q9NY91 659 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 SLC9A2Q9UBY0 812 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 SAMM50Q9Y512 469 aa25.38■■□□□ 1.65
UFD1-201ENST00000263202 WDR64B1ANS9 1081 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 UBA1P22314 1058 aaKnown RBP25.37■■□□□ 1.65
UFD1-201ENST00000263202 CTGFP29279 349 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 PSMC6P62333 389 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 DHX8Q14562 1220 aaKnown RBP25.37■■□□□ 1.65
UFD1-201ENST00000263202 KCNV1Q6PIU1 500 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 TPH2Q8IWU9 490 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 RDM1Q8NG50 284 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 USP6NLQ92738 828 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 MAN1B1Q9UKM7 699 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 AMPD3Q01432 767 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 BANK1Q8NDB2 785 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 C7orf25Q9BPX7 421 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 WRAP73Q9P2S5 460 aaPredicted RBP25.37■■□□□ 1.65
UFD1-201ENST00000263202 DNM3Q9UQ16 869 aa25.37■■□□□ 1.65
UFD1-201ENST00000263202 GOLGA6L3A6NEY3 463 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 TNPO2O14787 897 aaKnown RBP25.36■■□□□ 1.65
UFD1-201ENST00000263202 ARIH2O95376 493 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 P4HBP07237 508 aaKnown RBP25.36■■□□□ 1.65
UFD1-201ENST00000263202 NLRP12P59046 1061 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 ANO6Q4KMQ2 910 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 ISM2Q6H9L7 571 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 CYFIP1Q7L576 1253 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 SMAP1Q8IYB5 467 aaPredicted RBP25.36■■□□□ 1.65
UFD1-201ENST00000263202 GIMAP8Q8ND71 665 aaPredicted RBP25.36■■□□□ 1.65
UFD1-201ENST00000263202 GSDMAQ96QA5 445 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 LXNQ9BS40 222 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 RBSNQ9H1K0 784 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 ANO10Q9NW15 660 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.36■■□□□ 1.65
UFD1-201ENST00000263202 DDX41Q9UJV9 622 aaKnown RBP25.36■■□□□ 1.65
UFD1-201ENST00000263202 GJD2Q9UKL4 321 aa25.36■■□□□ 1.65
UFD1-201ENST00000263202 TBC1D8O95759 1140 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 SNAI1O95863 264 aaPredicted RBP25.35■■□□□ 1.65
UFD1-201ENST00000263202 HOXC6P09630 235 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 PLA2G4BP0C869 781 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 NEDD9Q14511 834 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 LY6KQ17RY6 165 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 CFHR5Q9BXR6 569 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 TRIM9Q9C026 710 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 VTA1Q9NP79 307 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 TELO2Q9Y4R8 837 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 PCDHA10Q9Y5I2 948 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 SORBS3O60504 671 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 CCDC62Q6P9F0 684 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 MSL3Q8N5Y2 521 aaKnown RBP25.35■■□□□ 1.65
UFD1-201ENST00000263202 TINF2Q9BSI4 451 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 KATNBL1Q9H079 304 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 PDGFCQ9NRA1 345 aa25.35■■□□□ 1.65
UFD1-201ENST00000263202 SYNGAP1Q96PV0 1343 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 MYMKA6NI61 221 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 SLC12A3P55017 1021 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 ACTR2P61160 394 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 LACTBP83111 547 aaPredicted RBP25.34■■□□□ 1.65
UFD1-201ENST00000263202 MORC3Q14149 939 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 TAPT1Q6NXT6 567 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 TRIML1Q8N9V2 468 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 SOCS4Q8WXH5 440 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms