RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 ALAS1P13196 640 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 MYL5Q02045 173 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 CNTN2Q02246 1040 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 C16orf59Q7L2K0 433 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 CCAR2Q8N163 923 aaKnown RBP10.86□□□□□ -0.67
TTC39A-201ENST00000262675 TRIML1Q8N9V2 468 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 PPP1R12CQ9BZL4 782 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 SLC28A3Q9HAS3 691 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 CYP39A1Q9NYL5 469 aa10.86□□□□□ -0.67
TTC39A-201ENST00000262675 SOWAHBA6NEL2 793 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 SFPQP23246 707 aaKnown RBP eCLIP10.85□□□□□ -0.67
TTC39A-201ENST00000262675 RFC2P35250 354 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 CPT1AP50416 773 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
TTC39A-201ENST00000262675 NCAPHQ15003 741 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 SHC4Q6S5L8 630 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 KRBA2Q6ZNG9 492 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 FILIP1Q7Z7B0 1213 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 KIF18AQ8NI77 898 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 ESR2Q92731 530 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 AGBL1Q96MI9 1066 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 SLC26A6Q9BXS9 759 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 RNF26Q9BY78 433 aaPredicted RBP10.85□□□□□ -0.67
TTC39A-201ENST00000262675 CCPG1Q9ULG6 757 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 STX8Q9UNK0 236 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.85□□□□□ -0.67
TTC39A-201ENST00000262675 PCDHA11Q9Y5I1 949 aa10.85□□□□□ -0.67
TTC39A-201ENST00000262675 DYNC1LI2O43237 492 aaPredicted RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 ORC4O43929 436 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 CALM1P0DP23 149 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 CALM2P0DP24 149 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 CALM3P0DP25 149 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 ACTN1P12814 892 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 NOVP48745 357 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 DUSP28Q4G0W2 176 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 CXCL17Q6UXB2 119 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 PHKBQ93100 1093 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 NOC4LQ9BVI4 516 aaKnown RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 KCNH3Q9ULD8 1083 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 SMC2O95347 1197 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 SMPD1P17405 629 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 MARCKSP29966 332 aaPredicted RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 CYP2C18P33260 490 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 BEX3Q00994 111 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 PTPN11Q06124 597 aaPredicted RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 AAK1Q2M2I8 961 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 NT5DC1Q5TFE4 455 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 TAPT1Q6NXT6 567 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 FCHSD1Q86WN1 690 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 CNNM3Q8NE01 707 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 UBAC1Q9BSL1 405 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 RANBP17Q9H2T7 1088 aaKnown RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 IFNKQ9P0W0 207 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 CGNQ9P2M7 1197 aaKnown RBP10.84□□□□□ -0.67
TTC39A-201ENST00000262675 DNAH12Q6ZR08 3092 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 ASTN1O14525 1302 aa10.84□□□□□ -0.67
TTC39A-201ENST00000262675 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.83□□□□□ -0.68
TTC39A-201ENST00000262675 ACRP10323 421 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 FANCCQ00597 558 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 CTDSPL2Q05D32 466 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
TTC39A-201ENST00000262675 MLKLQ8NB16 471 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 FANCBQ8NB91 859 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 ASB2Q96Q27 587 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 TCP11L1Q9NUJ3 509 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 RBM47A0AV96 593 aaKnown RBP10.83□□□□□ -0.68
TTC39A-201ENST00000262675 FGRP09769 529 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 TOP1P11387 765 aaKnown RBP10.83□□□□□ -0.68
TTC39A-201ENST00000262675 AKAP17AQ02040 695 aaKnown RBP10.83□□□□□ -0.68
TTC39A-201ENST00000262675 CCDC96Q2M329 555 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 NSMFQ6X4W1 530 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 RAB11FIP4Q86YS3 637 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 DIS3L2Q8IYB7 885 aaKnown RBP10.83□□□□□ -0.68
TTC39A-201ENST00000262675 AIFM3Q96NN9 605 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 PRDM12Q9H4Q4 367 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 GJB4Q9NTQ9 266 aa10.83□□□□□ -0.68
TTC39A-201ENST00000262675 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
TTC39A-201ENST00000262675 GBF1Q92538 1859 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 PBX2P40425 430 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 SYDE2Q5VT97 1194 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 KCTD1Q719H9 257 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 TMC6Q7Z403 805 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 ZNF654Q8IZM8 581 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 DNERQ8NFT8 737 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 PYM1Q9BRP8 204 aaKnown RBP10.82□□□□□ -0.68
TTC39A-201ENST00000262675 MTG1Q9BT17 334 aaPredicted RBP10.82□□□□□ -0.68
TTC39A-201ENST00000262675 MYH6P13533 1939 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 B4GALT4O60513 344 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 RXRAP19793 462 aa10.82□□□□□ -0.68
TTC39A-201ENST00000262675 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms