RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CCDC144BQ3MJ40 725 aa30.89■■■□□ 2.54
SMARCD3-201ENST00000262188 MSL3Q8N5Y2 521 aaKnown RBP30.89■■■□□ 2.54
SMARCD3-201ENST00000262188 TRPV1Q8NER1 839 aa30.89■■■□□ 2.54
SMARCD3-201ENST00000262188 SDF4Q9BRK5 362 aa30.89■■■□□ 2.54
SMARCD3-201ENST00000262188 TBC1D22BQ9NU19 505 aa30.89■■■□□ 2.54
SMARCD3-201ENST00000262188 A0A087WWV3 80 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 ZNF865P0CJ78 1059 aaPredicted RBP30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 HOXD10P28358 340 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 PPP2R5CQ13362 524 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 PDIA5Q14554 519 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 RAET1EQ8TD07 263 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 SCFD2Q8WU76 684 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 ECM1Q16610 540 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 CABP7Q86V35 215 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 LRRC15Q8TF66 581 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 RGL1Q9NZL6 768 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 HPSEQ9Y251 543 aa30.88■■■□□ 2.53
SMARCD3-201ENST00000262188 ADCY3O60266 1144 aa30.87■■■□□ 2.53
SMARCD3-201ENST00000262188 UBA7P41226 1012 aa30.87■■■□□ 2.53
SMARCD3-201ENST00000262188 CYP4A11Q02928 519 aa30.87■■■□□ 2.53
SMARCD3-201ENST00000262188 TTLL4Q14679 1199 aa30.87■■■□□ 2.53
SMARCD3-201ENST00000262188 SNX29Q8TEQ0 813 aa30.87■■■□□ 2.53
SMARCD3-201ENST00000262188 JPH1Q9HDC5 661 aaPredicted RBP30.87■■■□□ 2.53
SMARCD3-201ENST00000262188 KCNH3Q9ULD8 1083 aa30.87■■■□□ 2.53
SMARCD3-201ENST00000262188 SMPD1P17405 629 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 SNW1Q13573 536 aaKnown RBP30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 RAB34Q9BZG1 259 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 SAMM50Q9Y512 469 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 FARP2O94887 1054 aaPredicted RBP30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 ENGASEQ8NFI3 743 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 AK8Q96MA6 479 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 SENP7Q9BQF6 1050 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 DACT1Q9NYF0 836 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 FAM13BQ9NYF5 915 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 SLC9A2Q9UBY0 812 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 PTCH2Q9Y6C5 1203 aa30.86■■■□□ 2.53
SMARCD3-201ENST00000262188 BRCA2P51587 3418 aa30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 RBM47A0AV96 593 aaKnown RBP30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 POLR2DO15514 142 aaKnown RBP30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 MED24O75448 989 aa30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 TGFB3P10600 412 aa30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 CCDC73Q6ZRK6 1079 aa30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 MIER3Q7Z3K6 550 aa30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 NFASCO94856 1347 aa30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 IRF5Q13568 498 aa30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 EIF2AK1Q9BQI3 630 aaKnown RBP30.85■■■□□ 2.53
SMARCD3-201ENST00000262188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 POTEB3A0JP26 581 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 POTEFA5A3E0 1075 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 LETM1O95202 739 aaPredicted RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 HSPA1AP0DMV8 641 aaKnown RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 HSPA1BP0DMV9 641 aaKnown RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 HSPA8P11142 646 aaKnown RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 CCT6AP40227 531 aaKnown RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 CACNB2Q08289 660 aaPredicted RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 CELF3Q5SZQ8 465 aaKnown RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 MFSD14CQ5VZR4 134 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 POTEBQ6S5H4 581 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 FMR1NBQ8N0W7 255 aaPredicted RBP30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 BANK1Q8NDB2 785 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 RASSF8Q8NHQ8 419 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 DYDC2Q96IM9 177 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 PNMA5Q96PV4 448 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 MLXIPQ9HAP2 919 aa30.84■■■□□ 2.53
SMARCD3-201ENST00000262188 SYKP43405 635 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 ACTR2P61160 394 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 IRX5P78411 483 aaPredicted RBP30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 FAM160A1Q05DH4 1040 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 CTTNQ14247 550 aaKnown RBP30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 HSDL1Q3SXM5 330 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 KRT79Q5XKE5 535 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 DHX58Q96C10 678 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 DISC1Q9NRI5 854 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 WRAP73Q9P2S5 460 aaPredicted RBP30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 GNRH1P01148 92 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 SPATA31C1P0DKV0 1188 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 GRB10Q13322 594 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 NEDD9Q14511 834 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 CATSPER3Q86XQ3 398 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 DHX37Q8IY37 1157 aaKnown RBP30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 CCSER1Q9C0I3 900 aa30.83■■■□□ 2.53
SMARCD3-201ENST00000262188 FAM237AA0A1B0GTK4 181 aa30.82■■■□□ 2.52
SMARCD3-201ENST00000262188 KRT76Q01546 638 aa30.82■■■□□ 2.52
SMARCD3-201ENST00000262188 TNFAIP2Q03169 654 aa30.82■■■□□ 2.52
SMARCD3-201ENST00000262188 ARHGAP1Q07960 439 aa30.82■■■□□ 2.52
SMARCD3-201ENST00000262188 KCNV1Q6PIU1 500 aa30.82■■■□□ 2.52
SMARCD3-201ENST00000262188 CCDC94Q9BW85 323 aaPredicted RBP30.82■■■□□ 2.52
SMARCD3-201ENST00000262188 ZNF202O95125 648 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 CYBAP13498 195 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 PLCG1P19174 1290 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 LBX1P52954 281 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 UGCGQ16739 394 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 LONRF3Q496Y0 759 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 POTEGQ6S5H5 508 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 METTL7BQ6UX53 244 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 TRMT1LQ7Z2T5 733 aaKnown RBP30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 KCNK18Q7Z418 384 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 TCEAL9Q9UHQ7 104 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 PRKAR2AP13861 404 aaKnown RBP30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 CNGA1P29973 690 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms