RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 ZBED6P86452 979 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 KCTD2Q14681 263 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 ZBTB41Q5SVQ8 909 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 ZBTB10Q96DT7 871 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 ASCC2Q9H1I8 757 aaPredicted RBP11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 WBP4O75554 376 aaKnown RBP11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 DDIT3P35638 169 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 BLIDQ8IZY5 108 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 EEF2KMTQ96G04 330 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 MYO1FO00160 1098 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 MYL7Q01449 175 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 TEDDM1Q5T9Z0 273 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 ARHGEF25Q86VW2 580 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 SNRNP27Q8WVK2 155 aaKnown RBP11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 RAPGEF5Q92565 580 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 TMOD1P28289 359 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 TMTC4Q5T4D3 741 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 METTL23Q86XA0 190 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 TPH2Q8IWU9 490 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 REXO1Q8N1G1 1221 aaKnown RBP11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 PPM1KQ8N3J5 372 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 P2RX5Q93086 422 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 TTC17Q96AE7 1141 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 ADPGKQ9BRR6 497 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 APOBEC2Q9Y235 224 aaKnown RBP11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 KDRP35968 1356 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 ESRRBO95718 433 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 DEPDC1BQ8WUY9 529 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 PDLIM2Q96JY6 352 aa11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 STX18Q9P2W9 335 aaKnown RBP11.57□□□□□ -0.56
SLC6A4-201ENST00000261707 RASA4BC9J798 803 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 RASA4O43374 803 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 TMPRSS15P98073 1019 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CUL4AQ13619 759 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 MAN2A1Q16706 1144 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 FSCBQ5H9T9 825 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 RFX8Q6ZV50 586 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 RASSF3Q86WH2 238 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 GIPC2Q8TF65 315 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 DNAJC17Q9NVM6 304 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 H3BRJ5 948 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CAPN9O14815 690 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CTIFO43310 598 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 DEAF1O75398 565 aaPredicted RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 SERPINB3P29508 390 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CYP27A1Q02318 531 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 SLC12A1Q13621 1099 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 TRIM59Q8IWR1 403 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 ZNF654Q8IZM8 581 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 ZNF653Q96CK0 615 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 MAGEF1Q9HAY2 307 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 KCNH4Q9UQ05 1017 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 SMCO2A6NFE2 343 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 BTBD18B2RXH4 712 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 SCP2P22307 547 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 PDIA3P30101 505 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 ARHGDIAP52565 204 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 MRPL28Q13084 256 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CRYMQ14894 314 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 GRAMD1CQ8IYS0 662 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 SLC26A7Q8TE54 656 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 COA7Q96BR5 231 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 LSG1Q9H089 658 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 ZFYVE9O95405 1425 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CCDC188H7C350 402 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 EIF3HO15372 352 aaKnown RBP eCLIP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CCND1P24385 295 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 PMS2P54278 862 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CORO7P57737 925 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 PDZD4Q76G19 769 aaPredicted RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CCDC90BQ9GZT6 254 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 THAP9Q9H5L6 903 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 NUP160Q12769 1436 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CARMIL3Q8ND23 1372 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 DYTNA2CJ06 578 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 HNRNPCL2B2RXH8 293 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 HNRNPCL1O60812 293 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 ATP1A3P13637 1013 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 CARSP49589 748 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 USP14P54578 494 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 FAM186BQ8IYM0 893 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 DPF3Q92784 378 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 IPO11Q9UI26 975 aaKnown RBP11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 ARHGEF11O15085 1522 aa11.56□□□□□ -0.56
SLC6A4-201ENST00000261707 IPO5O00410 1097 aaKnown RBP11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 MYL3P08590 195 aa11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 EPHB1P54762 984 aa11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 PTGDRQ13258 359 aa11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 RARS2Q5T160 578 aaKnown RBP11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 WDR75Q8IWA0 830 aaKnown RBP11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 KITP10721 976 aa11.55□□□□□ -0.56
SLC6A4-201ENST00000261707 BASP1P80723 227 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms