RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 BACH1O14867 736 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 CTNND1O60716 968 aaKnown RBP12.59□□□□□ -0.39
TROAP-201ENST00000257909 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
TROAP-201ENST00000257909 GRIK3Q13003 919 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 LRRC55Q6ZSA7 311 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 HOOK3Q86VS8 718 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 DDX42Q86XP3 938 aaKnown RBP eCLIP12.59□□□□□ -0.39
TROAP-201ENST00000257909 PROM2Q8N271 834 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 ARMC2Q8NEN0 867 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 NSMCE1Q8WV22 266 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.59□□□□□ -0.39
TROAP-201ENST00000257909 NEUROG2Q9H2A3 272 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 FAM114A2Q9NRY5 505 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 C15orf41Q9Y2V0 281 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
TROAP-201ENST00000257909 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
TROAP-201ENST00000257909 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
TROAP-201ENST00000257909 F8VZ95 297 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 SNAP23O00161 211 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 CEP104O60308 925 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 ACCSLQ4AC99 568 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 NAIF1Q69YI7 327 aaPredicted RBP12.58□□□□□ -0.4
TROAP-201ENST00000257909 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 ZNF317Q96PQ6 595 aaPredicted RBP12.58□□□□□ -0.4
TROAP-201ENST00000257909 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.44e-7■■■□□ 16.7
TROAP-201ENST00000257909 MYO1EQ12965 1108 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 PIGWQ7Z7B1 504 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 SEC14L1Q92503 715 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 STAMBPL1Q96FJ0 436 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 STK17AQ9UEE5 414 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 ABCF2Q9UG63 623 aa12.58□□□□□ -0.4
TROAP-201ENST00000257909 A0A087X0T9 212 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 DCDC2CA8MYV0 355 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 NMT2O60551 498 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 NOL4O94818 638 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 FAM228BP0C875 321 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 GNAQP50148 359 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 POLR2FP61218 127 aaKnown RBP12.57□□□□□ -0.4
TROAP-201ENST00000257909 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
TROAP-201ENST00000257909 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 PSMD2Q13200 908 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 NOP53Q9NZM5 478 aaKnown RBP12.57□□□□□ -0.4
TROAP-201ENST00000257909 AIPL1Q9NZN9 384 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 SAMD15Q9P1V8 674 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 UTP11Q9Y3A2 253 aaKnown RBP12.57□□□□□ -0.4
TROAP-201ENST00000257909 KRIT1O00522 736 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 DAPK3O43293 454 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 ANP32DO95626 131 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 CLTAP09496 248 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 ATF3P18847 181 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 FLT3P36888 993 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 PPARDQ03181 441 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 ICA1Q05084 483 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 ZNF268Q14587 947 aaPredicted RBP12.57□□□□□ -0.4
TROAP-201ENST00000257909 TCP11Q8WWU5 503 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
TROAP-201ENST00000257909 ADAMTS1Q9UHI8 967 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 NOC2LQ9Y3T9 749 aaKnown RBP12.57□□□□□ -0.4
TROAP-201ENST00000257909 COL4A3BPQ9Y5P4 624 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 CCDC88AQ3V6T2 1871 aa12.57□□□□□ -0.4
TROAP-201ENST00000257909 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 USP17L21D6R901 530 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 PPFIA2O75334 1257 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 GCKP35557 465 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 FKBP3Q00688 224 aaKnown RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 RAPGEF1Q13905 1077 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 ASIC2Q16515 512 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 PNMA8AQ86V59 439 aaPredicted RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 KIRREL3Q8IZU9 778 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 PACSIN1Q9BY11 444 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 LRRC27Q9C0I9 530 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 DDX47Q9H0S4 455 aaKnown RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 TRPC6Q9Y210 931 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 DCCP43146 1447 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 GOLGA6L10A0A0M3HER8 536 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 MMEP08473 750 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 ALADP13716 330 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 CCNHP51946 323 aaPredicted RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 SARNPP82979 210 aaKnown RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 NBPF20Q3BBV1 942 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 BZW1Q7L1Q6 419 aaKnown RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 TRPM8Q7Z2W7 1104 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 RASGEF1CQ8N431 466 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 MDM1Q8TC05 714 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 SPDL1Q96EA4 605 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 THOC1Q96FV9 657 aaKnown RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 NSRP1Q9H0G5 558 aaKnown RBP12.56□□□□□ -0.4
TROAP-201ENST00000257909 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 AMACRQ9UHK6 382 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 AFF2P51816 1311 aa12.56□□□□□ -0.4
TROAP-201ENST00000257909 MYMKA6NI61 221 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 TSPY2A6NKD2 308 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms