RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 GFPT2O94808 682 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 LARP4BQ92615 738 aaKnown RBP18.37■□□□□ 0.53
SORT1-201ENST00000256637 ZNRF3Q9ULT6 936 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
SORT1-201ENST00000256637 PDIA3P30101 505 aaKnown RBP18.37■□□□□ 0.53
SORT1-201ENST00000256637 TRIP13Q15645 432 aaPredicted RBP18.37■□□□□ 0.53
SORT1-201ENST00000256637 ZKSCAN4Q969J2 545 aaPredicted RBP18.37■□□□□ 0.53
SORT1-201ENST00000256637 TXNP10599 105 aaKnown RBP18.36■□□□□ 0.53
SORT1-201ENST00000256637 MARCH10Q8NA82 808 aaPredicted RBP18.36■□□□□ 0.53
SORT1-201ENST00000256637 ENTPD7Q9NQZ7 604 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■■■■□ 24.6
SORT1-201ENST00000256637 I3L4J1 428 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 CIB2O75838 187 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 PSMC2P35998 433 aaKnown RBP18.36■□□□□ 0.53
SORT1-201ENST00000256637 NDUFA8P51970 172 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 DESI2Q9BSY9 194 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 RARBP10826 455 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 FAM26FQ5R3K3 315 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 CLEC10AQ8IUN9 316 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 CHAMP1Q96JM3 812 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 AIFM3Q96NN9 605 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 PFDN6O15212 129 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 SLC16A4O15374 487 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 LCP1P13796 627 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
SORT1-201ENST00000256637 GOLGA5Q8TBA6 731 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 MYOZ2Q9NPC6 264 aa18.36■□□□□ 0.53
SORT1-201ENST00000256637 PRRG1O14668 218 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 ADCK5Q3MIX3 580 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
SORT1-201ENST00000256637 CCDC13Q8IYE1 715 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 ARHGEF2Q92974 986 aaKnown RBP18.35■□□□□ 0.53
SORT1-201ENST00000256637 DYDC2Q96IM9 177 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 DARS2Q6PI48 645 aaKnown RBP18.35■□□□□ 0.53
SORT1-201ENST00000256637 SYCE1Q8N0S2 351 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 TAOK1Q7L7X3 1001 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 SNX19Q92543 992 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 SETDB1Q15047 1291 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 CCDC170Q8IYT3 715 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 GPATCH11Q8N954 259 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 NVLO15381 856 aaKnown RBP18.35■□□□□ 0.53
SORT1-201ENST00000256637 FAM186BQ8IYM0 893 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 CNOT6LQ96LI5 555 aaKnown RBP18.35■□□□□ 0.53
SORT1-201ENST00000256637 SEPT5Q99719 369 aaPredicted RBP18.35■□□□□ 0.53
SORT1-201ENST00000256637 FAM213AQ9BRX8 229 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 PLA2G4BP0C869 781 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 UBE3CQ15386 1083 aa18.35■□□□□ 0.53
SORT1-201ENST00000256637 RBBP5Q15291 538 aaKnown RBP18.34■□□□□ 0.53
SORT1-201ENST00000256637 WDR11Q9BZH6 1224 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 CRB1P82279 1406 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 POC1B-GALNT4F8VUJ3 575 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 SRGAP2O75044 1071 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 SRGAP2BP0DMP2 458 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 SP100P23497 879 aaPredicted RBP18.34■□□□□ 0.53
SORT1-201ENST00000256637 MAPK4P31152 587 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 ERCC6LQ2NKX8 1250 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 CCDC121Q6ZUS5 278 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 ADGRF4Q8IZF3 695 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 EFCC1Q9HA90 598 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 CIITAP33076 1130 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 EPHX2P34913 555 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 YWHAGP61981 247 aaKnown RBP eCLIP18.34■□□□□ 0.53
SORT1-201ENST00000256637 ZMYM4Q5VZL5 1548 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 GPC3P51654 580 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 SLC17A8Q8NDX2 589 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 CPA4Q9UI42 421 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 HPCAL4Q9UM19 191 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 IQSEC2Q5JU85 1478 aa18.34■□□□□ 0.53
SORT1-201ENST00000256637 RPGRIP1Q96KN7 1286 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 KRIT1O00522 736 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 KRT1P04264 644 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 NEDD4P46934 1319 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 OR1G1P47890 313 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 FCGRTP55899 365 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 PARK7Q99497 189 aaKnown RBP18.33■□□□□ 0.53
SORT1-201ENST00000256637 DYRK4Q9NR20 520 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 GCNT4Q9P109 453 aa18.33■□□□□ 0.53
SORT1-201ENST00000256637 PMLP29590 882 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 THOC5Q13769 683 aaKnown RBP18.33■□□□□ 0.52
SORT1-201ENST00000256637 TRIM14Q14142 442 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 MCTP2Q6DN12 878 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 TCP11Q8WWU5 503 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 SUGT1Q9Y2Z0 365 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 MLKLQ8NB16 471 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 ATP2A3Q93084 1043 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 USP28Q96RU2 1077 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 PNMA2Q9UL42 364 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 CLCA2Q9UQC9 943 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 CLDN3O15551 220 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 CAVIN2O95810 425 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 LMNB1P20700 586 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 ATP5DP30049 168 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 VPS72Q15906 364 aa18.33■□□□□ 0.52
SORT1-201ENST00000256637 ATP6V0A4Q9HBG4 840 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 PHKA2P46019 1235 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 JADE1Q6IE81 842 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 SIK2Q9H0K1 926 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 PLCB1Q9NQ66 1216 aa18.32■□□□□ 0.52
SORT1-201ENST00000256637 DYNC1I1O14576 645 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms