RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 FAM114A1Q8IWE2 563 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 TBC1D5Q92609 795 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 PLEKHG4BQ96PX9 1271 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 ZCWPW1Q9H0M4 648 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 ARHGAP20Q9P2F6 1191 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 FAN1Q9Y2M0 1017 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
PDE6B-201ENST00000255622 NT5C2P49902 561 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 RAB27AP51159 221 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 MRPS25P82663 173 aaKnown RBP12.43□□□□□ -0.42
PDE6B-201ENST00000255622 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 VWA3BQ502W6 1294 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 FKBP15Q5T1M5 1219 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
PDE6B-201ENST00000255622 C15orf52Q6ZUT6 534 aaKnown RBP12.43□□□□□ -0.42
PDE6B-201ENST00000255622 DDX12PQ92771 950 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 PSMB7Q99436 277 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 NUP58Q9BVL2 599 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 FGFBP2Q9BYJ0 223 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 NDST4Q9H3R1 872 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 MMRN2Q9H8L6 949 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 JADE2Q9NQC1 790 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 CAPN6Q9Y6Q1 641 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 SERPINB2P05120 415 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 C2orf54Q08AI8 447 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 APBB1IPQ7Z5R6 666 aaPredicted RBP12.43□□□□□ -0.42
PDE6B-201ENST00000255622 CCDC102AQ96A19 550 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 CCDC42Q96M95 316 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 ERGIC2Q96RQ1 377 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 KANSL2Q9H9L4 492 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 JMJD4Q9H9V9 463 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 SIK3Q9Y2K2 1263 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 GAKO14976 1311 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 RAD21O60216 631 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 GYS1P13807 737 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 PLCG2P16885 1265 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 SCNN1DP51172 638 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
PDE6B-201ENST00000255622 UNC13DQ70J99 1090 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 KCTD1Q719H9 257 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 ADGRF4Q8IZF3 695 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 CAGE1Q8TC20 777 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 RAD54LQ92698 747 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 RABEP2Q9H5N1 569 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 USP21Q9UK80 565 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 CAPN7Q9Y6W3 813 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 LRRC53A6NM62 1247 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 NOVP48745 357 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDE6B-201ENST00000255622 USP14P54578 494 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
PDE6B-201ENST00000255622 RETREG2Q8NC44 543 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 ZKSCAN4Q969J2 545 aaPredicted RBP12.42□□□□□ -0.42
PDE6B-201ENST00000255622 CABS1Q96KC9 395 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 SMARCAL1Q9NZC9 954 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 ESYT2A0FGR8 921 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 MOCS3O95396 460 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 EIF4A3P38919 411 aaKnown RBP12.42□□□□□ -0.42
PDE6B-201ENST00000255622 APBA1Q02410 837 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 TMEM266Q2M3C6 531 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 RRAGAQ7L523 313 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 SPATA21Q7Z572 469 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 CCDC170Q8IYT3 715 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 CERS5Q8N5B7 392 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 ANKRD13CQ8N6S4 541 aa12.42□□□□□ -0.42
PDE6B-201ENST00000255622 SHTN1A0MZ66 631 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 SSBP05455 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDE6B-201ENST00000255622 VAV2P52735 878 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 KIF5AQ12840 1032 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 RASA3Q14644 834 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 WDR93Q6P2C0 686 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 HAS1Q92839 578 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 RBM17Q96I25 401 aaKnown RBP12.41□□□□□ -0.42
PDE6B-201ENST00000255622 CCDC114Q96M63 670 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 IFIH1Q9BYX4 1025 aaKnown RBP12.41□□□□□ -0.42
PDE6B-201ENST00000255622 PSD3Q9NYI0 1048 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 EHD2Q9NZN4 543 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 NUB1Q9Y5A7 615 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 LY75O60449 1722 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 NPHP3-ACAD11A0A0J9YXS1 232 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 USP17L10C9JJH3 530 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 CXCR5P32302 372 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 KIF11P52732 1056 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 GABPAQ06546 454 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 LRRC55Q6ZSA7 311 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 CERKQ8TCT0 537 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
PDE6B-201ENST00000255622 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
PDE6B-201ENST00000255622 ACBD3Q9H3P7 528 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 TMOD4Q9NZQ9 345 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 DDX25Q9UHL0 483 aaKnown RBP12.41□□□□□ -0.42
PDE6B-201ENST00000255622 PLAGL2Q9UPG8 496 aa12.41□□□□□ -0.42
PDE6B-201ENST00000255622 A0A1W2PQJ5 194 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 ATP6V1G1O75348 118 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms