RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TTMPQ5BVD1 217 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 NAA16Q6N069 864 aaPredicted RBP12.96□□□□□ -0.33
CCNA1-201ENST00000255465 ERICH1Q86X53 443 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 PRMT6Q96LA8 375 aaPredicted RBP12.96□□□□□ -0.33
CCNA1-201ENST00000255465 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.33
CCNA1-201ENST00000255465 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 SNRKQ9NRH2 765 aa12.96□□□□□ -0.33
CCNA1-201ENST00000255465 PASKQ96RG2 1323 aa12.96□□□□□ -0.34
CCNA1-201ENST00000255465 DOCK2Q92608 1830 aa12.96□□□□□ -0.34
CCNA1-201ENST00000255465 USO1O60763 962 aaKnown RBP12.95□□□□□ -0.34
CCNA1-201ENST00000255465 CBX3Q13185 183 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 DPCR1Q3MIW9 517 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 CCDC65Q8IXS2 484 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
CCNA1-201ENST00000255465 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 FGD4Q96M96 766 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 GDAP1L1Q96MZ0 367 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 NDNQ99608 321 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 MTA3Q9BTC8 594 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 TRAIPQ9BWF2 469 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 SLC12A4Q9UP95 1085 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 PITPNM2Q9BZ72 1349 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 TRAF5O00463 557 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 FAM200BP0CF97 657 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 HSPA6P17066 643 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 ZAP70P43403 619 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 FMR1Q06787 632 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCNA1-201ENST00000255465 PPP1R7Q15435 360 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 TAF11Q15544 211 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 ANKRD20A2Q5SQ80 823 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
CCNA1-201ENST00000255465 ANKRD20A1Q5TYW2 823 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 GKAP1Q5VSY0 366 aaPredicted RBP12.95□□□□□ -0.34
CCNA1-201ENST00000255465 ANKRD20A3Q5VUR7 823 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 KRT26Q7Z3Y9 468 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 SLC35F6Q8N357 371 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 MREGQ8N565 214 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 FSIP1Q8NA03 581 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 IFT43Q96FT9 208 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 SEC16BQ96JE7 1060 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 RNPC3Q96LT9 517 aaKnown RBP12.95□□□□□ -0.34
CCNA1-201ENST00000255465 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 BIN2Q9UBW5 565 aaPredicted RBP12.95□□□□□ -0.34
CCNA1-201ENST00000255465 CEP131Q9UPN4 1083 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 MAPK8IP1Q9UQF2 711 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 L3MBTL1Q9Y468 752 aa12.95□□□□□ -0.34
CCNA1-201ENST00000255465 IFIT3O14879 490 aaKnown RBP12.94□□□□□ -0.34
CCNA1-201ENST00000255465 SLC3A2P08195 630 aaKnown RBP12.94□□□□□ -0.34
CCNA1-201ENST00000255465 ATP2A2P16615 1042 aaKnown RBP12.94□□□□□ -0.34
CCNA1-201ENST00000255465 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 MRPS25P82663 173 aaKnown RBP12.94□□□□□ -0.34
CCNA1-201ENST00000255465 ADCY1Q08828 1119 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 ADAM9Q13443 819 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 ITIH4Q14624 930 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 KRT72Q14CN4 511 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 ADALQ6DHV7 355 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 C16orf87Q6PH81 154 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 HHIPL2Q6UWX4 724 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 ZNF365Q70YC5 407 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 ZNF572Q7Z3I7 529 aaPredicted RBP12.94□□□□□ -0.34
CCNA1-201ENST00000255465 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 STAG2Q8N3U4 1231 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 AGAP11Q8TF27 550 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 SPIRE2Q8WWL2 714 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 MIS12Q9H081 205 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 HSD3B7Q9H2F3 369 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 MAST2Q6P0Q8 1798 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 MYH7P12883 1935 aa12.94□□□□□ -0.34
CCNA1-201ENST00000255465 CCT8L1PA6NM43 557 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 AKR1B15C9JRZ8 316 aaPredicted RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 E7EVH7 732 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 CCT6AP40227 531 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 APLP1P51693 650 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 KLC1Q07866 573 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 DIXDC1Q155Q3 683 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 PAPD7Q5XG87 772 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 DLK2Q6UY11 383 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 ZNF662Q6ZS27 426 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 NCCRP1Q6ZVX7 275 aaPredicted RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 RSPH3Q86UC2 560 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 STKLD1Q8NE28 680 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 MAML3Q96JK9 1138 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 MTRQ99707 1265 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 PREBQ9HCU5 417 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
CCNA1-201ENST00000255465 SH3GLB1Q9Y371 365 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 OPLAHO14841 1288 aa12.93□□□□□ -0.34
CCNA1-201ENST00000255465 ACADSP16219 412 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms