RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ABCB11O95342 1321 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 ITSN1Q15811 1721 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 INHBAP08476 426 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 SRGAP2CP0DJJ0 459 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 SMYD2Q9NRG4 433 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 HOMER3Q9NSC5 361 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 ERCC6L2Q5T890 1561 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 MYO1FO00160 1098 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 ZNF853P0CG23 659 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 C10orf76Q5T2E6 689 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 KIAA1841Q6NSI8 718 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 C11orf57Q6ZUT1 292 aaPredicted RBP9.44□□□□□ -0.9
PTCD3-201ENST00000254630 FOXP4Q8IVH2 680 aaPredicted RBP9.44□□□□□ -0.9
PTCD3-201ENST00000254630 NCAPGQ9BPX3 1015 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 CPSF3Q9UKF6 684 aaKnown RBP9.44□□□□□ -0.9
PTCD3-201ENST00000254630 PCDHA6Q9UN73 950 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 PCDHA8Q9Y5H6 950 aa9.44□□□□□ -0.9
PTCD3-201ENST00000254630 USP17L5A8MUK1 530 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 SLC4A1P02730 911 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 ARL4AP40617 200 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 DYNLT1P63172 113 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 OR6B2Q6IFH4 312 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 CLEC4GQ6UXB4 293 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 UBN1Q9NPG3 1134 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 RRAGDQ9NQL2 400 aaPredicted RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 EMILIN3Q9NT22 766 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 KRT10P13645 584 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 EIF2AK2P19525 551 aaKnown RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 SGO2Q562F6 1265 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 DSTYKQ6XUX3 929 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 SMAP1Q8IYB5 467 aaPredicted RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 TTLL11Q8NHH1 800 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 UHMK1Q8TAS1 419 aaKnown RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 LRRC8CQ8TDW0 803 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 ATP6V0A4Q9HBG4 840 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 MAGED2Q9UNF1 606 aaPredicted RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 POLR1AO95602 1720 aaPredicted RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 H7C1W4 665 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 WDR46O15213 610 aaKnown RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 CD58P19256 250 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 PRELPP51888 382 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 IRX4P78413 519 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 AP3B2Q13367 1082 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 JADE1Q6IE81 842 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 BANK1Q8NDB2 785 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 DEPDC1BQ8WUY9 529 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 MRPL47Q9HD33 250 aaKnown RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 PCDHB6Q9Y5E3 794 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 POC1B-GALNT4F8VUJ3 575 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 IKBKBO14920 756 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 NR5A1Q13285 461 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 THOC5Q13769 683 aaKnown RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 ELMSAN1Q6PJG2 1045 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 APOBEC3FQ8IUX4 373 aaKnown RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 SYNE4Q8N205 404 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 CCNYQ8ND76 341 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 NHEJ1Q9H9Q4 299 aaPredicted RBP9.43□□□□□ -0.9
PTCD3-201ENST00000254630 GUCY2DQ02846 1103 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 MMEL1Q495T6 779 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 HSPH1Q92598 858 aa9.43□□□□□ -0.9
PTCD3-201ENST00000254630 GOLGA8IPA6NC78 632 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 GOLGA8JA6NMD2 632 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 CASP2P42575 452 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 GPSM2P81274 684 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 NLRP4Q96MN2 994 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 MMP19Q99542 508 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 CAPS2Q9BXY5 557 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 LRRC4Q9HBW1 653 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 RAVER2Q9HCJ3 691 aaKnown RBP9.42□□□□□ -0.9
PTCD3-201ENST00000254630 PCDHA13Q9Y5I0 950 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 SETBP1Q9Y6X0 1596 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 GOLGA8QA0A0J9YX86 632 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 GOLGA8OA6NCC3 632 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 GOLGA8NF8WBI6 632 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 PRPSAP2O60256 369 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 ECEL1O95672 775 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 CYP2D6P10635 497 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 SLFN12LQ6IEE8 588 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 ZNF449Q6P9G9 518 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 SLC35F6Q8N357 371 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 LRGUKQ96M69 825 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 GH2P01242 217 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 MTMR1Q13613 665 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 TDRD7Q8NHU6 1098 aaKnown RBP9.42□□□□□ -0.9
PTCD3-201ENST00000254630 PARD3BQ8TEW8 1205 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 HAUS8Q9BT25 410 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 MROH7-TTC4A0A0A0MT08 1334 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 GNAT1P11488 350 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 TNFAIP2Q03169 654 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 RESTQ13127 1097 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 SLC27A3Q5K4L6 730 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 PPP1R18Q6NYC8 613 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 PPP4R3CPQ6ZMV5 832 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 C7orf31Q8N865 590 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 PBKQ96KB5 322 aa9.42□□□□□ -0.9
PTCD3-201ENST00000254630 CRB1P82279 1406 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms