RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SPICE1Q8N0Z3 855 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 CYP2W1Q8TAV3 490 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 EDEM3Q9BZQ6 932 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 ENTPD3O75355 529 aa21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 RPA1P27694 616 aa21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 FAM193AP78312 1265 aa21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 APBA1Q02410 837 aa21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 PABPC4Q13310 644 aaKnown RBP eCLIP21.58■■□□□ 1.055e-6■□□□□ 10.5
CDC42EP1-201ENST00000249014 GIT2Q14161 759 aa21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 ZC3H3Q8IXZ2 948 aaKnown RBP21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 C7orf43Q8WVR3 580 aa21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 JADE2Q9NQC1 790 aa21.58■■□□□ 1.05
CDC42EP1-201ENST00000249014 YDJCA8MPS7 323 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 MSH4O15457 936 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 MOCS3O95396 460 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 GFPT1Q06210 699 aaPredicted RBP21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 BTNL9Q6UXG8 535 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 TRIM58Q8NG06 486 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 CSRNP1Q96S65 589 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 CRACR2AQ9BSW2 395 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 CEP72Q9P209 647 aa21.58■■□□□ 1.04
CDC42EP1-201ENST00000249014 TLR2O60603 784 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 GNA14O95837 355 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 FOSP01100 380 aaPredicted RBP21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 MCTP2Q6DN12 878 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 SALL4Q9UJQ4 1053 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 PRR12Q9ULL5 1215 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 TUBBP07437 444 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 CIITAP33076 1130 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 CKAP4Q07065 602 aaKnown RBP21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 MAPK8IP2Q13387 824 aaPredicted RBP21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 ADAM9Q13443 819 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 FAM83BQ5T0W9 1011 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 SYT2Q8N9I0 419 aaPredicted RBP21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 ERMNQ8TAM6 284 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 REEP2Q9BRK0 252 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 LSM14BQ9BX40 385 aaKnown RBP21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 VAV3Q9UKW4 847 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 JRKLQ9Y4A0 524 aa21.57■■□□□ 1.04
CDC42EP1-201ENST00000249014 ECE1P42892 770 aa21.56■■□□□ 1.04
CDC42EP1-201ENST00000249014 KIAA1755Q5JYT7 1200 aa21.56■■□□□ 1.04
CDC42EP1-201ENST00000249014 ZBTB9Q96C00 473 aa21.56■■□□□ 1.04
CDC42EP1-201ENST00000249014 FAM20AQ96MK3 541 aa21.56■■□□□ 1.04
CDC42EP1-201ENST00000249014 PDE11AQ9HCR9 933 aa21.56■■□□□ 1.04
CDC42EP1-201ENST00000249014 SNX12Q9UMY4 172 aa21.56■■□□□ 1.04
CDC42EP1-201ENST00000249014 DNM3Q9UQ16 869 aa21.56■■□□□ 1.04
CDC42EP1-201ENST00000249014 SSU72P8A0A1W2PR75 194 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 TACC1O75410 805 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 HOXD13P35453 343 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 MAGEA1P43355 309 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 POLR2FP61218 127 aaKnown RBP21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 CYP4A11Q02928 519 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 RPGRIP1Q96KN7 1286 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 DRC1Q96MC2 740 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 PJA2O43164 708 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 CYP2C19P33261 490 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 CASP8Q14790 479 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 EDRF1Q3B7T1 1238 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 CC2D2BQ6DHV5 1058 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 ARHGAP27Q6ZUM4 889 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 SFR1Q86XK3 245 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 CREG2Q8IUH2 290 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 ANKRD13CQ8N6S4 541 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 GBP3Q9H0R5 595 aa21.55■■□□□ 1.04
CDC42EP1-201ENST00000249014 NR2F2P24468 414 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 TDRD12Q587J7 1177 aaKnown RBP21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 PPP4R3CPQ6ZMV5 832 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 CAGE1Q8TC20 777 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 CNKSR1Q969H4 720 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 BCAS3Q9H6U6 928 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 COL2A1P02458 1487 aaPredicted RBP21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 RSPH10B2B2RC85 870 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 EML1O00423 815 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 RSPH10BP0C881 870 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 GYS2P54840 703 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 RASSF7Q02833 373 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 SFMBT2Q5VUG0 894 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 EPM2AIP1Q7L775 607 aaPredicted RBP21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 COG1Q8WTW3 980 aa21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 SYN2Q92777 582 aaPredicted RBP21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.54■■□□□ 1.04
CDC42EP1-201ENST00000249014 TCP10L2B9ZVM9 353 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 RBAK-RBAKDNI3L0D1 243 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 PIK3CDO00329 1044 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 C2orf54Q08AI8 447 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 SLC30A10Q6XR72 485 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 MSL3Q8N5Y2 521 aaKnown RBP21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 PKNOX2Q96KN3 472 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 POLD4Q9HCU8 107 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 FAM184BQ9ULE4 1060 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 IGLV3-22A0A075B6J6 115 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 LRRIQ3A6PVS8 624 aaPredicted RBP21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 CETN3O15182 167 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 SERPING1P05155 500 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 CYP3A4P08684 503 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 MYBP10242 640 aa21.53■■□□□ 1.04
CDC42EP1-201ENST00000249014 KCNH2Q12809 1159 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms