RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 MOXD1Q6UVY6 613 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 CAGE1Q8TC20 777 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 PPP1R13LQ8WUF5 828 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 ZNF577Q9BSK1 485 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 BACH2Q9BYV9 841 aa27.64■■■□□ 2.02
SDF2L1-201ENST00000248958 EMSYQ7Z589 1322 aa27.64■■■□□ 2.01
SDF2L1-201ENST00000248958 JAK2O60674 1132 aa27.63■■■□□ 2.01
SDF2L1-201ENST00000248958 GNAT1P11488 350 aa27.63■■■□□ 2.01
SDF2L1-201ENST00000248958 MCM2P49736 904 aa27.63■■■□□ 2.01
SDF2L1-201ENST00000248958 HMGN5P82970 282 aaKnown RBP27.63■■■□□ 2.01
SDF2L1-201ENST00000248958 RETREG2Q8NC44 543 aa27.63■■■□□ 2.01
SDF2L1-201ENST00000248958 ERAP1Q9NZ08 941 aa27.63■■■□□ 2.01
SDF2L1-201ENST00000248958 TCEAL9Q9UHQ7 104 aa27.63■■■□□ 2.01
SDF2L1-201ENST00000248958 KAT6AQ92794 2004 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 C17orf102A2RUQ5 167 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 ATG7O95352 703 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 KRT2P35908 639 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 ACTR2P61160 394 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 LRIT3Q3SXY7 679 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 TNPO1Q92973 898 aaKnown RBP27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 AZI2Q9H6S1 392 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 TELO2Q9Y4R8 837 aa27.62■■■□□ 2.01
SDF2L1-201ENST00000248958 CYP3A7-CYP3A51PA0A087WV96 503 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 LGR5O75473 907 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 SMIM10L2AP0DMW4 78 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 SMIM10L2BP0DMW5 78 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 CSF2RAP15509 400 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 CYP3A7P24462 503 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 PTK7Q13308 1070 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 Q4G0T1 1027 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 RPUSD2Q8IZ73 545 aaKnown RBP27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 GLG1Q92896 1179 aa27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 NAP1L4Q99733 375 aaKnown RBP27.61■■■□□ 2.01
SDF2L1-201ENST00000248958 DHX15O43143 795 aaKnown RBP27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 EDIL3O43854 480 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 DTNBO60941 627 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 HOXC8P31273 242 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 TRIM50Q86XT4 487 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 LENG9Q96B70 501 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 WNT8AQ9H1J5 351 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 IL23AQ9NPF7 189 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 GJB4Q9NTQ9 266 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 UMODL1Q5DID0 1318 aa27.6■■■□□ 2.01
SDF2L1-201ENST00000248958 TANC1Q9C0D5 1861 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 TRIP12Q14669 1992 aaPredicted RBP27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 MMP1P03956 469 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 RFC2P35250 354 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 CCL23P55773 120 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 KRT76Q01546 638 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 RBL2Q08999 1139 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 SHHQ15465 462 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 INF2Q27J81 1249 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 ZNF746Q6NUN9 644 aaPredicted RBP27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 PSRC1Q6PGN9 363 aaPredicted RBP27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 PLPPR4Q7Z2D5 763 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 SMAP1Q8IYB5 467 aaPredicted RBP27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 AFAP1L1Q8TED9 768 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 MBOAT7Q96N66 472 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 CTAGE1Q96RT6 745 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 RNPEPQ9H4A4 650 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 NRCAMQ92823 1304 aa27.59■■■□□ 2.01
SDF2L1-201ENST00000248958 DDX39AO00148 427 aaKnown RBP27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 PARNO95453 639 aaKnown RBP27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 PFKMP08237 780 aa27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 GCFC2P16383 781 aaKnown RBP27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 SLC26A2P50443 739 aa27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 STAT5BP51692 787 aa27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 MIS18BP1Q6P0N0 1132 aa27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 NEK8Q86SG6 692 aa27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 ATP6V0A1Q93050 837 aa27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 RIT2Q99578 217 aa27.58■■■□□ 2.01
SDF2L1-201ENST00000248958 IGKV6D-21A0A0A0MT36 114 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 EPHB4P54760 987 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 C9orf50Q5SZB4 431 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 FAM160B1Q5W0V3 765 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 KRT40Q6A162 431 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 ABHD15Q6UXT9 468 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 PIK3AP1Q6ZUJ8 805 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 FAM184AQ8NB25 1140 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 TRIOBPQ9H2D6 2365 aa27.57■■■□□ 2
SDF2L1-201ENST00000248958 MSH4O15457 936 aa27.56■■■□□ 2
SDF2L1-201ENST00000248958 IQCF3P0C7M6 154 aa27.56■■■□□ 2
SDF2L1-201ENST00000248958 SAFBQ15424 915 aaKnown RBP eCLIP27.56■■■□□ 2
SDF2L1-201ENST00000248958 PPP4R3AQ6IN85 833 aa27.56■■■□□ 2
SDF2L1-201ENST00000248958 SERINC5Q86VE9 423 aa27.56■■■□□ 2
SDF2L1-201ENST00000248958 OXER1Q8TDS5 423 aa27.56■■■□□ 2
SDF2L1-201ENST00000248958 PCYT2Q99447 389 aa27.56■■■□□ 2
SDF2L1-201ENST00000248958 TDP2O95551 362 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 CCNE2O96020 404 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 LETM2Q2VYF4 491 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 TMEM240Q5SV17 173 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 DHX38Q92620 1227 aaKnown RBP27.55■■■□□ 2
SDF2L1-201ENST00000248958 SLC5A5Q92911 643 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 SCLYQ96I15 445 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 C8orf76Q96K31 380 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 RNPC3Q96LT9 517 aaKnown RBP27.55■■■□□ 2
SDF2L1-201ENST00000248958 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.55■■■□□ 22e-9■■□□□ 13.3
SDF2L1-201ENST00000248958 TEKT3Q9BXF9 490 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 MTIF3Q9H2K0 278 aaKnown RBP27.55■■■□□ 2
SDF2L1-201ENST00000248958 SETD4Q9NVD3 440 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms