RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TRIM44Q96DX7 344 aaPredicted RBP14.81□□□□□ -0.04
SLIRP-201ENST00000238688 PAGE5Q96GU1 130 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 KBTBD4Q9NVX7 518 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 TMEM260Q9NX78 707 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 LRWD1Q9UFC0 647 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 CCPG1Q9ULG6 757 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 PCDHA5Q9Y5H7 936 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 FRMPD4Q14CM0 1322 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 DNAH12Q6ZR08 3092 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 GOLGA6L6A8MZA4 724 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 OPLAHO14841 1288 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 MARCH6O60337 910 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 FCER1AP12319 257 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 DPYDQ12882 1025 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 PNOCQ13519 176 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 MORC3Q14149 939 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 KCNB1Q14721 858 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 LRRC26Q2I0M4 334 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 USP17L6PQ6QN14 398 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 C7orf61Q8IZ16 206 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 RASSF8Q8NHQ8 419 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 GDF15Q99988 308 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 PANK2Q9BZ23 570 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 PCDHA12Q9UN75 941 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 LCTP09848 1927 aa14.8□□□□□ -0.04
SLIRP-201ENST00000238688 ZNF536O15090 1300 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 MSCO60682 206 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 CNGA1P29973 690 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 CDC25BP30305 580 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 COPB2P35606 906 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 MYL5Q02045 173 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 SPECC1Q5M775 1068 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 USP49Q70CQ1 688 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 PDILTQ8N807 584 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 CDK5RAP3Q96JB5 506 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 MMP19Q99542 508 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 TTC12Q9H892 705 aaPredicted RBP14.79□□□□□ -0.04
SLIRP-201ENST00000238688 ZMYND8Q9ULU4 1186 aaPredicted RBP14.79□□□□□ -0.04
SLIRP-201ENST00000238688 LAMA3Q16787 3333 aa14.79□□□□□ -0.04
SLIRP-201ENST00000238688 DNAJC25-GNG10A0A024R161 153 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 SEPT4O43236 478 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 SLC37A4O43826 429 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 TDP2O95551 362 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 TAL1P17542 331 aaPredicted RBP14.78□□□□□ -0.04
SLIRP-201ENST00000238688 DPCR1Q3MIW9 517 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 SNRNP48Q6IEG0 339 aaKnown RBP14.78□□□□□ -0.04
SLIRP-201ENST00000238688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.78□□□□□ -0.04
SLIRP-201ENST00000238688 ETNPPLQ8TBG4 499 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 MRFAP1L1Q96HT8 127 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 FGD4Q96M96 766 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 TEX13BQ9BXU2 312 aa14.78□□□□□ -0.04
SLIRP-201ENST00000238688 DIS3Q9Y2L1 958 aaKnown RBP14.78□□□□□ -0.04
SLIRP-201ENST00000238688 A0A087X0B3 334 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 EDIL3O43854 480 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 CFBP00751 764 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 SYN1P17600 705 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 TECP42680 631 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 TXKP42681 527 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 COBLL1Q53SF7 1204 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 CCDC174Q6PII3 467 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 C11orf57Q6ZUT1 292 aaPredicted RBP14.77□□□□□ -0.05
SLIRP-201ENST00000238688 LUZP1Q86V48 1076 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 ENOX1Q8TC92 643 aaKnown RBP14.77□□□□□ -0.05
SLIRP-201ENST00000238688 HAS1Q92839 578 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 C7orf25Q9BPX7 421 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 TINF2Q9BSI4 451 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 WDR11Q9BZH6 1224 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
SLIRP-201ENST00000238688 SLC5A4Q9NY91 659 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 MAN1B1Q9UKM7 699 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 LTBP2Q14767 1821 aa14.77□□□□□ -0.05
SLIRP-201ENST00000238688 PVALEFA0A1B0GWK0 134 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 DNM1LO00429 736 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 STAM2O75886 525 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 ZNF865P0CJ78 1059 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-201ENST00000238688 BMP8BP34820 402 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 ZNF76P36508 570 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 STIM1Q13586 685 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 KCTD2Q14681 263 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 TMEM119Q4V9L6 283 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 CEP55Q53EZ4 464 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 NAALADL2Q58DX5 795 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 GJC2Q5T442 439 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-201ENST00000238688 FOXR2Q6PJQ5 311 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 DHX40Q8IX18 779 aaKnown RBP14.76□□□□□ -0.05
SLIRP-201ENST00000238688 CPXCR1Q8N123 301 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 NEK9Q8TD19 979 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-201ENST00000238688 FBXO40Q9UH90 709 aa14.76□□□□□ -0.05
SLIRP-201ENST00000238688 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 SOX1O00570 391 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-201ENST00000238688 MAFGO15525 162 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 ADCY5O95622 1261 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 SNAI1O95863 264 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-201ENST00000238688 PLCG1P19174 1290 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
SLIRP-201ENST00000238688 ZNF658Q5TYW1 1059 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-201ENST00000238688 PCNX4Q63HM2 1172 aa14.75□□□□□ -0.05
SLIRP-201ENST00000238688 SV2BQ7L1I2 683 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms