RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SNX29Q8TEQ0 813 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 RXFP1Q9HBX9 757 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 GID8Q9NWU2 228 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 CIDEBQ9UHD4 219 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 MYL1P05976 194 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 CCDC166P0CW27 439 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 PRLRP16471 622 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 PGM1P36871 562 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 LGSNQ5TDP6 509 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 PATL1Q86TB9 770 aaKnown RBP13.9□□□□□ -0.18
VAMP4-201ENST00000236192 ZFAND2BQ8WV99 257 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 PRCCQ92733 491 aaPredicted RBP13.9□□□□□ -0.18
VAMP4-201ENST00000236192 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
VAMP4-201ENST00000236192 SBNO2Q9Y2G9 1366 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 IL15P40933 162 aaPredicted RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 NR1H3Q13133 447 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 MAEAQ7L5Y9 396 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 TATDN2Q93075 761 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 MLXIPLQ9NP71 852 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 TMOD4Q9NZQ9 345 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 HNRNPRO43390 633 aaKnown RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 MCF2P10911 925 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 PAX3P23760 479 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 TBX2Q13207 712 aaPredicted RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 DCAF17Q5H9S7 520 aaPredicted RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 HAUS3Q68CZ6 603 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 SHC4Q6S5L8 630 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 CROCCP3Q8IVE0 287 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 KSR1Q8IVT5 923 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 PITPNM2Q9BZ72 1349 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 A0A0G2JND7 137 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 ANXA1P04083 346 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 ADD1P35611 737 aaKnown RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 CD302Q8IX05 232 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 CRACR2BQ8N4Y2 399 aaPredicted RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 KCNB2Q92953 911 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
VAMP4-201ENST00000236192 RNPEPL1Q9HAU8 725 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 VPS54Q9P1Q0 977 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 CAPN9O14815 690 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 MAN1A1P33908 653 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 ASPHQ12797 758 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 PPP1R15BQ5SWA1 713 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 CYP39A1Q9NYL5 469 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 PCDHGC5Q9Y5F6 944 aa13.89□□□□□ -0.19
VAMP4-201ENST00000236192 GIPC1O14908 333 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 DAPK3O43293 454 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 CDC25AP30304 524 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 PEX5P50542 639 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 P2RX5Q93086 422 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 LCA5LO95447 670 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 RPL13P26373 211 aaKnown RBP13.88□□□□□ -0.19
VAMP4-201ENST00000236192 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
VAMP4-201ENST00000236192 DDI1Q8WTU0 396 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 CASKIN2Q8WXE0 1202 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 PPP2R5BQ15173 497 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 RAPGEF4Q8WZA2 1011 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 MS4A14Q96JA4 679 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 CCDC138Q96M89 665 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 CFAP69A5D8W1 941 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 MAN2A1Q16706 1144 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
VAMP4-201ENST00000236192 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 PANK4Q9NVE7 773 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 CTNNAL1Q9UBT7 734 aa13.88□□□□□ -0.19
VAMP4-201ENST00000236192 DMGDHQ9UI17 866 aaKnown RBP13.88□□□□□ -0.19
VAMP4-201ENST00000236192 ARIH1Q9Y4X5 557 aaPredicted RBP13.88□□□□□ -0.19
VAMP4-201ENST00000236192 TRPM1Q7Z4N2 1603 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 POC1B-GALNT4F8VUJ3 575 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 WFS1O76024 890 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 RGS2P41220 211 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 MRPS9P82933 396 aaKnown RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 CCDC15Q0P6D6 951 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 KRT81Q14533 505 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 GPR101Q96P66 508 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 TRIM56Q9BRZ2 755 aaKnown RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 DDX47Q9H0S4 455 aaKnown RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 NRDE2Q9H7Z3 1164 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 NLRP2Q9NX02 1062 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 EPS15L1Q9UBC2 864 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 SNX24Q9Y343 169 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 RAD51CO43502 376 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 ACSL3O95573 720 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 HSPD1P10809 573 aaKnown RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 CA4P22748 312 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 ERVK-24P63145 666 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 FAM187AA6NFU0 413 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms