RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 ADAMTS4O75173 837 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 ATG7O95352 703 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 YEATS4O95619 227 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-201ENST00000235958 NKX3-2P78367 333 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 KRT76Q01546 638 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 SPIRE1Q08AE8 756 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 FSCN1Q16658 493 aaKnown RBP11.46□□□□□ -0.57
HMGCL-201ENST00000235958 ZNF746Q6NUN9 644 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-201ENST00000235958 ABHD15Q6UXT9 468 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 KLHDC9Q8NEP7 349 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 PPTC7Q8NI37 304 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 SCAND2PQ9GZW5 306 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-201ENST00000235958 DISC1Q9NRI5 854 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 PCDHA10Q9Y5I2 948 aa11.46□□□□□ -0.57
HMGCL-201ENST00000235958 SRPRBQ9Y5M8 271 aaKnown RBP11.46□□□□□ -0.57
HMGCL-201ENST00000235958 MYH9P35579 1960 aaKnown RBP11.46□□□□□ -0.58
HMGCL-201ENST00000235958 VWA3AA6NCI4 1184 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 MYADML2A6NDP7 307 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 CHMP2AO43633 222 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 PPP6R2O75170 966 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 SFNP31947 248 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 CPT1AP50416 773 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 GRIN1Q05586 938 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 LRRC41Q15345 812 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 KCNA10Q16322 511 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 DGKDQ16760 1214 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 BRDTQ58F21 947 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 SWSAP1Q6NVH7 229 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 MIER3Q7Z3K6 550 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 RNF180Q86T96 592 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 IGSF22Q8N9C0 903 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 U2AF1L4Q8WU68 220 aaKnown RBP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 LEO1Q8WVC0 666 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 SPATA32Q96LK8 384 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 CLIC6Q96NY7 704 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 LRWD1Q9UFC0 647 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 TCEAL9Q9UHQ7 104 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 FBXO2Q9UK22 296 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 SAMM50Q9Y512 469 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-201ENST00000235958 WDR81Q562E7 1941 aa11.45□□□□□ -0.58
HMGCL-201ENST00000235958 ELP1O95163 1332 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 IGKV6D-21A0A0A0MT36 114 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 POTEMA6NI47 508 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 WDR64B1ANS9 1081 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 ZEB2O60315 1214 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 KPNA6O60684 536 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 PSAPP07602 524 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 MMP3P08254 477 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 HOXD8P13378 290 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-201ENST00000235958 CDC25AP30304 524 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-201ENST00000235958 GJA8P48165 433 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 EPHA7Q15375 998 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 TMEM266Q2M3C6 531 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 UTP14CQ5TAP6 766 aaKnown RBP11.44□□□□□ -0.58
HMGCL-201ENST00000235958 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 MIS18BP1Q6P0N0 1132 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
HMGCL-201ENST00000235958 PCSK9Q8NBP7 692 aaKnown RBP11.44□□□□□ -0.58
HMGCL-201ENST00000235958 RDM1Q8NG50 284 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 KCNG4Q8TDN1 519 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 PCYT2Q99447 389 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 HSD17B14Q9BPX1 270 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 PCDHA7Q9UN72 937 aa11.44□□□□□ -0.58
HMGCL-201ENST00000235958 KAT6AQ92794 2004 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 PP2D1A8MPX8 630 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 BACH1O14867 736 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 LGR5O75473 907 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 SLITRK3O94933 977 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 P4HBP07237 508 aaKnown RBP11.43□□□□□ -0.58
HMGCL-201ENST00000235958 ASGR1P07306 291 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 MYL3P08590 195 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 SUPT20HL2P0C7V6 817 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 CST5P28325 142 aaPredicted RBP11.43□□□□□ -0.58
HMGCL-201ENST00000235958 LONP1P36776 959 aaKnown RBP11.43□□□□□ -0.58
HMGCL-201ENST00000235958 ME1P48163 572 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 STAT5BP51692 787 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 JAK3P52333 1124 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 SPECC1Q5M775 1068 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 AXDND1Q5T1B0 1012 aaPredicted RBP11.43□□□□□ -0.58
HMGCL-201ENST00000235958 CXCL17Q6UXB2 119 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 CLEC17AQ6ZS10 378 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 GLG1Q92896 1179 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 EIF2AK1Q9BQI3 630 aaKnown RBP11.43□□□□□ -0.58
HMGCL-201ENST00000235958 C16orf70Q9BSU1 422 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 TSEN34Q9BSV6 310 aaKnown RBP11.43□□□□□ -0.58
HMGCL-201ENST00000235958 RAB34Q9BZG1 259 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 SMARCAD1Q9H4L7 1026 aa11.43□□□□□ -0.58
HMGCL-201ENST00000235958 RGL1Q9NZL6 768 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms