RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 KANK3Q6NY19 840 aa11□□□□□ -0.65
TTC1-201ENST00000231238 DLK2Q6UY11 383 aa11□□□□□ -0.65
TTC1-201ENST00000231238 FCHSD1Q86WN1 690 aa11□□□□□ -0.65
TTC1-201ENST00000231238 LDHDQ86WU2 507 aa11□□□□□ -0.65
TTC1-201ENST00000231238 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
TTC1-201ENST00000231238 ANKRD13AQ8IZ07 590 aa11□□□□□ -0.65
TTC1-201ENST00000231238 RNF214Q8ND24 703 aa11□□□□□ -0.65
TTC1-201ENST00000231238 ENGASEQ8NFI3 743 aa11□□□□□ -0.65
TTC1-201ENST00000231238 ANO3Q9BYT9 981 aa11□□□□□ -0.65
TTC1-201ENST00000231238 ELP3Q9H9T3 547 aa11□□□□□ -0.65
TTC1-201ENST00000231238 DOLKQ9UPQ8 538 aa11□□□□□ -0.65
TTC1-201ENST00000231238 MORC2Q9Y6X9 1032 aaPredicted RBP11□□□□□ -0.65
TTC1-201ENST00000231238 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
TTC1-201ENST00000231238 DOCK1Q14185 1865 aa11□□□□□ -0.65
TTC1-201ENST00000231238 FSD2A1L4K1 749 aa11□□□□□ -0.65
TTC1-201ENST00000231238 ICAM1P05362 532 aa11□□□□□ -0.65
TTC1-201ENST00000231238 ALAS1P13196 640 aa11□□□□□ -0.65
TTC1-201ENST00000231238 HOXA13P31271 388 aaPredicted RBP11□□□□□ -0.65
TTC1-201ENST00000231238 UBA7P41226 1012 aa11□□□□□ -0.65
TTC1-201ENST00000231238 GRIN1Q05586 938 aa11□□□□□ -0.65
TTC1-201ENST00000231238 TYRO3Q06418 890 aa11□□□□□ -0.65
TTC1-201ENST00000231238 DGKZQ13574 1117 aa11□□□□□ -0.65
TTC1-201ENST00000231238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11□□□□□ -0.653e-6■■■■■ 31.4
TTC1-201ENST00000231238 GADL1Q6ZQY3 521 aa11□□□□□ -0.65
TTC1-201ENST00000231238 MCF2L2Q86YR7 1114 aa11□□□□□ -0.65
TTC1-201ENST00000231238 DHX58Q96C10 678 aa11□□□□□ -0.65
TTC1-201ENST00000231238 TIGD1Q96MW7 591 aa11□□□□□ -0.65
TTC1-201ENST00000231238 HOMER2Q9NSB8 354 aa11□□□□□ -0.65
TTC1-201ENST00000231238 CCDC39Q9UFE4 941 aa11□□□□□ -0.65
TTC1-201ENST00000231238 DDX25Q9UHL0 483 aaKnown RBP11□□□□□ -0.65
TTC1-201ENST00000231238 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
TTC1-201ENST00000231238 TAL1P17542 331 aaPredicted RBP10.99□□□□□ -0.65
TTC1-201ENST00000231238 PRPHP41219 470 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 TXKP42681 527 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 STX1AQ16623 288 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.99□□□□□ -0.65
TTC1-201ENST00000231238 CYP2U1Q7Z449 544 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 TEX2Q8IWB9 1127 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 RAVER2Q9HCJ3 691 aaKnown RBP10.99□□□□□ -0.65
TTC1-201ENST00000231238 HPSEQ9Y251 543 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 SNCAIPQ9Y6H5 919 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
TTC1-201ENST00000231238 H3BM21 787 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 TDP2O95551 362 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 USP11P51784 963 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 PLS1Q14651 629 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 COG2Q14746 738 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 KRBA2Q6ZNG9 492 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 ERO1BQ86YB8 467 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 IQUBQ8NA54 791 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 PLPP7Q8NBV4 271 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 ATG4CQ96DT6 458 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 EPSTI1Q96J88 318 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 CDK5RAP3Q96JB5 506 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 C12orf42Q96LP6 360 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 AK8Q96MA6 479 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 NAT10Q9H0A0 1025 aaKnown RBP10.98□□□□□ -0.65
TTC1-201ENST00000231238 RBSNQ9H1K0 784 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 TMEM60Q9H2L4 133 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 ANO10Q9NW15 660 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 USP25Q9UHP3 1055 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 SERTAD1Q9UHV2 236 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 AFG3L2Q9Y4W6 797 aa10.98□□□□□ -0.65
TTC1-201ENST00000231238 FAM237AA0A1B0GTK4 181 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 MEIS2O14770 477 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 SMC2O95347 1197 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 STAT6P42226 847 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 TECP42680 631 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 IRX3P78415 501 aaPredicted RBP10.97□□□□□ -0.65
TTC1-201ENST00000231238 ARHGAP4P98171 946 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 PTSQ03393 145 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 PPATQ06203 517 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 LONRF3Q496Y0 759 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 ANO6Q4KMQ2 910 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 OXLD1Q5BKU9 147 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 RRAGBQ5VZM2 374 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 MAP1SQ66K74 1059 aaPredicted RBP10.97□□□□□ -0.65
TTC1-201ENST00000231238 PPP4R3AQ6IN85 833 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 NPAS3Q8IXF0 933 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 CALML4Q96GE6 196 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 SLC38A10Q9HBR0 1119 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 HOXC10Q9NYD6 342 aa10.97□□□□□ -0.65
TTC1-201ENST00000231238 BECN2A8MW95 431 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 GOLGA6L19H0YKK7 550 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 MEN1O00255 615 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 BIN1O00499 593 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 VWA5AO00534 786 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 CAVIN2O95810 425 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.65
TTC1-201ENST00000231238 PRR16Q569H4 304 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 NSMFQ6X4W1 530 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 RBM43Q6ZSC3 357 aaKnown RBP10.96□□□□□ -0.65
TTC1-201ENST00000231238 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 MOB2Q70IA6 237 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 CABP7Q86V35 215 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 C4orf32Q8N8J7 132 aa10.96□□□□□ -0.65
TTC1-201ENST00000231238 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
TTC1-201ENST00000231238 ERCC4Q92889 916 aaPredicted RBP10.96□□□□□ -0.65
TTC1-201ENST00000231238 SMARCE1Q969G3 411 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms