RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 C3orf67Q6ZVT6 689 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 TEX19Q8NA77 164 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 ZKSCAN4Q969J2 545 aaPredicted RBP9.13□□□□□ -0.95
SPARC-201ENST00000231061 ZNF274Q96GC6 653 aaPredicted RBP9.13□□□□□ -0.95
SPARC-201ENST00000231061 NAT10Q9H0A0 1025 aaKnown RBP9.13□□□□□ -0.95
SPARC-201ENST00000231061 MTUS1Q9ULD2 1270 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 PRKAB1Q9Y478 270 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 PCDHGC5Q9Y5F6 944 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 M0QX08 132 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 GNL2Q13823 731 aaKnown RBP9.13□□□□□ -0.95
SPARC-201ENST00000231061 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 ERAP2Q6P179 960 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 BRSK1Q8TDC3 778 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 SKA1Q96BD8 255 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
SPARC-201ENST00000231061 XAGE2Q96GT9 111 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 PSKH2Q96QS6 385 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 FOXP3Q9BZS1 431 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 PCDHA7Q9UN72 937 aa9.13□□□□□ -0.95
SPARC-201ENST00000231061 POTEFA5A3E0 1075 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 TRIM43BA6NCK2 446 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 CCDC69A6NI79 296 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 GNRH1P01148 92 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 HNF1BP35680 557 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 PMS2P54278 862 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 PSMD6Q15008 389 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 SUZ12Q15022 739 aaKnown RBP9.12□□□□□ -0.95
SPARC-201ENST00000231061 PI16Q6UXB8 463 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 ARHGAP18Q8N392 663 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 USP38Q8NB14 1042 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 SPATA5Q8NB90 893 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 ACMSDQ8TDX5 336 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 LRRC45Q96CN5 670 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 ALS2CR12Q96Q35 445 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 MRPL46Q9H2W6 279 aaKnown RBP9.12□□□□□ -0.95
SPARC-201ENST00000231061 UBN1Q9NPG3 1134 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
SPARC-201ENST00000231061 GJB4Q9NTQ9 266 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 LUZP4Q9P127 313 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 PPP2R3BQ9Y5P8 575 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 AFDNP55196 1824 aaKnown RBP9.12□□□□□ -0.95
SPARC-201ENST00000231061 DDHD2O94830 711 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 ZAP70P43403 619 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 MASP1P48740 699 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 CDK17Q00537 523 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 SNW1Q13573 536 aaKnown RBP9.12□□□□□ -0.95
SPARC-201ENST00000231061 OR8K1Q8NGG5 319 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 VTI1BQ9UEU0 232 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 CLIC4Q9Y696 253 aa9.12□□□□□ -0.95
SPARC-201ENST00000231061 GOLGA8JA6NMD2 632 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 GOLGA8TH3BQL2 631 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 GOLGA8HP0CJ92 632 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 FERP16591 822 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 ATP5DP30049 168 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 OXCT1P55809 520 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 MRPS5P82675 430 aaKnown RBP9.11□□□□□ -0.95
SPARC-201ENST00000231061 NFIAQ12857 509 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 TAF12Q16514 161 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 ISM2Q6H9L7 571 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 LRRC8AQ8IWT6 810 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 COLGALT2Q8IYK4 626 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 E2F7Q96AV8 911 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 FAM89AQ96GI7 184 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 STRN4Q9NRL3 753 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 TYW1Q9NV66 732 aaKnown RBP9.11□□□□□ -0.95
SPARC-201ENST00000231061 MOSPD1Q9UJG1 213 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 ZNF711Q9Y462 761 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 A0A0G2JS52 829 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 CCDC169A6NNP5 214 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 AHCYL1O43865 530 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 YY1P25490 414 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 CDC25BP30305 580 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 NR2C2P49116 596 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 NDUFA8P51970 172 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 ATL3Q6DD88 541 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 FBXO38Q6PIJ6 1188 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 ATF5Q9Y2D1 282 aaPredicted RBP9.11□□□□□ -0.95
SPARC-201ENST00000231061 R3HDM2Q9Y2K5 976 aaKnown RBP9.11□□□□□ -0.95
SPARC-201ENST00000231061 PCDH11XQ9BZA7 1347 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 PCDH11YQ9BZA8 1340 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 CAMTA1Q9Y6Y1 1673 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 AP3B1O00203 1094 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 ZNF213O14771 459 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 DIAPH2O60879 1101 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 FDPSP14324 419 aaKnown RBP9.11□□□□□ -0.95
SPARC-201ENST00000231061 MYL6P60660 151 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 SCARF1Q14162 830 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 METTL24Q5JXM2 366 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 DHX40Q8IX18 779 aaKnown RBP9.11□□□□□ -0.95
SPARC-201ENST00000231061 RNF10Q8N5U6 811 aaKnown RBP9.11□□□□□ -0.95
SPARC-201ENST00000231061 CEP70Q8NHQ1 597 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 NCOA7Q8NI08 942 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 TTC25Q96NG3 672 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 ATAD3AQ9NVI7 634 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 SCN11AQ9UI33 1791 aa9.11□□□□□ -0.95
SPARC-201ENST00000231061 USP27XA6NNY8 438 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 CHUKO15111 745 aa9.1□□□□□ -0.95
SPARC-201ENST00000231061 GNPATO15228 680 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms