RNA–Protein interactions for RNA: ENST00000227667.7

APOC3-201, Transcript of apolipoprotein C3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC3, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-201ENST00000227667 PPFIA4O75335 1185 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 NMIQ13287 307 aaPredicted RBP12.59□□□□□ -0.39
APOC3-201ENST00000227667 CWC27Q6UX04 472 aaKnown RBP12.59□□□□□ -0.39
APOC3-201ENST00000227667 KREMEN2Q8NCW0 462 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 RGS22Q8NE09 1264 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 SPPL3Q8TCT6 385 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 NSUN6Q8TEA1 469 aaKnown RBP12.59□□□□□ -0.39
APOC3-201ENST00000227667 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 APPBP2Q92624 585 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 P2RX5Q93086 422 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 TLE6Q9H808 572 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 NCOR2Q9Y618 2525 aa12.59□□□□□ -0.39
APOC3-201ENST00000227667 A0A0D9SFI3 127 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 TREHO43280 583 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 SORBS3O60504 671 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 CAND2O75155 1236 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 ITGB1P05556 798 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 SP100P23497 879 aaPredicted RBP12.58□□□□□ -0.4
APOC3-201ENST00000227667 PPARAQ07869 468 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 USH1GQ495M9 461 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 NAALADL2Q58DX5 795 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 ASTLQ6HA08 431 aaPredicted RBP12.58□□□□□ -0.4
APOC3-201ENST00000227667 UBALD2Q8IYN6 164 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 KCNG4Q8TDN1 519 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 MICAL1Q8TDZ2 1067 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 POF1BQ8WVV4 589 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 SUSD6Q92537 303 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 TAAR1Q96RJ0 339 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 IWS1Q96ST2 819 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.4
APOC3-201ENST00000227667 PER2O15055 1255 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
APOC3-201ENST00000227667 RANBP6O60518 1105 aaKnown RBP12.57□□□□□ -0.4
APOC3-201ENST00000227667 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
APOC3-201ENST00000227667 MTMR3Q13615 1198 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 ZMYM1Q5SVZ6 1142 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 KLHL23Q8NBE8 558 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 KCNB2Q92953 911 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 ZNF689Q96CS4 500 aaPredicted RBP12.57□□□□□ -0.4
APOC3-201ENST00000227667 SPATA33Q96N06 139 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 RMDN3Q96TC7 470 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 NAPBQ9H115 298 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 MFSD1Q9H3U5 465 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 RC3H2Q9HBD1 1191 aaKnown RBP12.57□□□□□ -0.4
APOC3-201ENST00000227667 PCDHGC5Q9Y5F6 944 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
APOC3-201ENST00000227667 KMT2BQ9UMN6 2715 aaPredicted RBP12.56□□□□□ -0.4
APOC3-201ENST00000227667 M0R2C6 588 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 ENPP3O14638 875 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 PPFIA3O75145 1194 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 SMIM10L2AP0DMW4 78 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 SMIM10L2BP0DMW5 78 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 HOXD8P13378 290 aaPredicted RBP12.56□□□□□ -0.4
APOC3-201ENST00000227667 HSPA4P34932 840 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 ANAPC15P60006 121 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 RBM10P98175 930 aaKnown RBP12.56□□□□□ -0.4
APOC3-201ENST00000227667 PUM1Q14671 1186 aaKnown RBP eCLIP12.56□□□□□ -0.4
APOC3-201ENST00000227667 HSDL1Q3SXM5 330 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 ARHGEF16Q5VV41 709 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 KIAA2013Q8IYS2 634 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 SYTL5Q8TDW5 730 aaPredicted RBP12.56□□□□□ -0.4
APOC3-201ENST00000227667 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 NEK1Q96PY6 1258 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 ANO2Q9NQ90 1003 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 SORCS3Q9UPU3 1222 aa12.56□□□□□ -0.4
APOC3-201ENST00000227667 MRPL42Q9Y6G3 142 aaKnown RBP12.56□□□□□ -0.4
APOC3-201ENST00000227667 H3BRB1 525 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 DGKIO75912 1065 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 BRD1O95696 1058 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
APOC3-201ENST00000227667 EIF2AK2P19525 551 aaKnown RBP12.55□□□□□ -0.4
APOC3-201ENST00000227667 CLCN5P51795 746 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 PTH1RQ03431 593 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 NECTIN1Q15223 517 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 CELF3Q5SZQ8 465 aaKnown RBP12.55□□□□□ -0.4
APOC3-201ENST00000227667 ZNF589Q86UQ0 364 aaPredicted RBP12.55□□□□□ -0.4
APOC3-201ENST00000227667 ATP8B4Q8TF62 1192 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 SNX21Q969T3 373 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 TUT1Q9H6E5 874 aaKnown RBP12.55□□□□□ -0.4
APOC3-201ENST00000227667 HELLSQ9NRZ9 838 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 COL20A1Q9P218 1284 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
APOC3-201ENST00000227667 EP300Q09472 2414 aaPredicted RBP12.54□□□□□ -0.4
APOC3-201ENST00000227667 GGPS1O95749 300 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 NR3C2P08235 984 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 SRGAP2BP0DMP2 458 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 GHRP10912 638 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 TOP1P11387 765 aaKnown RBP12.54□□□□□ -0.4
APOC3-201ENST00000227667 GNAT1P11488 350 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 HOXC8P31273 242 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 NOVP48745 357 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 CTDSPL2Q05D32 466 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 FAM26DQ5JW98 314 aa12.54□□□□□ -0.4
APOC3-201ENST00000227667 VN1R2Q8NFZ6 395 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms