RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CCDC96Q2M329 555 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 ACER1Q8TDN7 264 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 NDST4Q9H3R1 872 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 GPCPD1Q9NPB8 672 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 MYMKA6NI61 221 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 RAD21O60216 631 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 ECE1P42892 770 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 CASP8Q14790 479 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 MUM1L1Q5H9M0 696 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 NOA1Q8NC60 698 aaKnown RBP27.57■■■□□ 2
RUNDC3A-201ENST00000225441 FAM71BQ8TC56 605 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 NUCKS1Q9H1E3 243 aaKnown RBP27.57■■■□□ 2
RUNDC3A-201ENST00000225441 VAT1LQ9HCJ6 419 aa27.57■■■□□ 2
RUNDC3A-201ENST00000225441 NDUFB10O96000 172 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 ATP1A1P05023 1023 aaKnown RBP27.56■■■□□ 2
RUNDC3A-201ENST00000225441 INPP5BP32019 993 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 NCAPH2Q6IBW4 605 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 ZNF572Q7Z3I7 529 aaPredicted RBP27.56■■■□□ 2
RUNDC3A-201ENST00000225441 KRT26Q7Z3Y9 468 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 SECISBP2LQ93073 1101 aaKnown RBP27.56■■■□□ 2
RUNDC3A-201ENST00000225441 GMCL1Q96IK5 515 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 UBA5Q9GZZ9 404 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 TRIM10Q9UDY6 481 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 JRKLQ9Y4A0 524 aa27.56■■■□□ 2
RUNDC3A-201ENST00000225441 SLC1A4P43007 532 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 MRPL12P52815 198 aaKnown RBP27.55■■■□□ 2
RUNDC3A-201ENST00000225441 HYIQ5T013 277 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 SH2D4AQ9H788 454 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 ADAM21Q9UKJ8 722 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 TACC1O75410 805 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 HSP90B2PQ58FF3 399 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 CCDC70Q6NSX1 233 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 KCTD1Q719H9 257 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 WRNIP1Q96S55 665 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 SLC39A2Q9NP94 309 aa27.55■■■□□ 2
RUNDC3A-201ENST00000225441 KDM3AQ9Y4C1 1321 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 H3BQF6 201 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 CLK2P49760 499 aaKnown RBP27.54■■■□□ 2
RUNDC3A-201ENST00000225441 MCM6Q14566 821 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 EAPPQ56P03 285 aaPredicted RBP27.54■■■□□ 2
RUNDC3A-201ENST00000225441 TTBK2Q6IQ55 1244 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 PNMA8AQ86V59 439 aaPredicted RBP27.54■■■□□ 2
RUNDC3A-201ENST00000225441 NT5C3AQ9H0P0 336 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 PDE11AQ9HCR9 933 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 TMEM260Q9NX78 707 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 DOCK1Q14185 1865 aa27.54■■■□□ 2
RUNDC3A-201ENST00000225441 DLK2Q6UY11 383 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 SCYL3Q8IZE3 742 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 SYN2Q92777 582 aaPredicted RBP27.53■■■□□ 2
RUNDC3A-201ENST00000225441 KLRG1Q96E93 195 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 GOPCQ9HD26 462 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 ZCCHC17Q9NP64 241 aaKnown RBP27.53■■■□□ 2
RUNDC3A-201ENST00000225441 FZD1Q9UP38 647 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 GNA14O95837 355 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 AARSP49588 968 aaKnown RBP eCLIP27.53■■■□□ 2
RUNDC3A-201ENST00000225441 CCDC155Q8N6L0 562 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 SNX29Q8TEQ0 813 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 CUL5Q93034 780 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 LACRTQ9GZZ8 138 aa27.53■■■□□ 2
RUNDC3A-201ENST00000225441 BMP2KQ9NSY1 1161 aaPredicted RBP27.53■■■□□ 2
RUNDC3A-201ENST00000225441 SSU72P8A0A1W2PR75 194 aa27.52■■■□□ 2
RUNDC3A-201ENST00000225441 PJA2O43164 708 aa27.52■■■□□ 2
RUNDC3A-201ENST00000225441 MTMR8Q96EF0 704 aa27.52■■■□□ 2
RUNDC3A-201ENST00000225441 CEP63Q96MT8 703 aa27.52■■■□□ 2
RUNDC3A-201ENST00000225441 MMS19Q96T76 1030 aa27.52■■■□□ 2
RUNDC3A-201ENST00000225441 GLIS2Q9BZE0 524 aaPredicted RBP27.52■■■□□ 2
RUNDC3A-201ENST00000225441 ERICH4A6NGS2 130 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 MAPK8IP2Q13387 824 aaPredicted RBP27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 MCTP2Q6DN12 878 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 LRRC55Q6ZSA7 311 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 VCPKMTQ9H867 229 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 PCDHA13Q9Y5I0 950 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 SLC37A4O43826 429 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 EDIL3O43854 480 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 BMP3P12645 472 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 KLK7P49862 253 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 MMGT1Q8N4V1 131 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 ZKSCAN4Q969J2 545 aaPredicted RBP27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 JMJD4Q9H9V9 463 aa27.51■■□□□ 1.99
RUNDC3A-201ENST00000225441 RCCD1A6NED2 376 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 DCAF8L1A6NGE4 600 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 ENC1O14682 589 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 IDEP14735 1019 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 SLC16A2P36021 539 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 FKBP3Q00688 224 aaKnown RBP27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 KIAA1755Q5JYT7 1200 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 ADGRF4Q8IZF3 695 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 MYOCDQ8IZQ8 938 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 DDX12PQ92771 950 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 COA7Q96BR5 231 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 ALS2CR12Q96Q35 445 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 IFIH1Q9BYX4 1025 aaKnown RBP27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 SNX12Q9UMY4 172 aa27.5■■□□□ 1.99
RUNDC3A-201ENST00000225441 USP2O75604 605 aaPredicted RBP27.49■■□□□ 1.99
RUNDC3A-201ENST00000225441 TDP2O95551 362 aa27.49■■□□□ 1.99
RUNDC3A-201ENST00000225441 TCP1P17987 556 aaKnown RBP27.49■■□□□ 1.99
RUNDC3A-201ENST00000225441 SPICE1Q8N0Z3 855 aa27.49■■□□□ 1.99
RUNDC3A-201ENST00000225441 RNF10Q8N5U6 811 aaKnown RBP27.49■■□□□ 1.99
RUNDC3A-201ENST00000225441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.49■■□□□ 1.99
RUNDC3A-201ENST00000225441 CDCA5Q96FF9 252 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms