RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 Q9Y3F1 56 aa15.79■□□□□ 0.12
SEC61B-201ENST00000223641 IGKV6D-21A0A0A0MT36 114 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 WDR64B1ANS9 1081 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 DDX39AO00148 427 aaKnown RBP15.78■□□□□ 0.12
SEC61B-201ENST00000223641 GH1P01241 217 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 SPATA31C1P0DKV0 1188 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 PFKFB1P16118 471 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 LIG1P18858 919 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 MUTP22033 750 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 RPA1P27694 616 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 GRK4P32298 578 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 UBA7P41226 1012 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 NDUFA8P51970 172 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 JAK3P52333 1124 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 ACTR2P61160 394 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 TNFAIP2Q03169 654 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 LAMC2Q13753 1193 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 KRT79Q5XKE5 535 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 NCAPH2Q6IBW4 605 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 ABHD15Q6UXT9 468 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 CABP7Q86V35 215 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 DHX37Q8IY37 1157 aaKnown RBP15.78■□□□□ 0.12
SEC61B-201ENST00000223641 FMR1NBQ8N0W7 255 aaPredicted RBP15.78■□□□□ 0.12
SEC61B-201ENST00000223641 KCTD17Q8N5Z5 321 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 FSIP1Q8NA03 581 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 COPS5Q92905 334 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 EIF2AK1Q9BQI3 630 aaKnown RBP15.78■□□□□ 0.12
SEC61B-201ENST00000223641 POLR3CQ9BUI4 534 aaPredicted RBP15.78■□□□□ 0.12
SEC61B-201ENST00000223641 DISC1Q9NRI5 854 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 FAM13BQ9NYF5 915 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 FAM184BQ9ULE4 1060 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 TELO2Q9Y4R8 837 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 PCDHA10Q9Y5I2 948 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 PTCH2Q9Y6C5 1203 aa15.78■□□□□ 0.12
SEC61B-201ENST00000223641 A0A087X0B3 334 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 GSTTP1A0A1W2PQM5 241 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 SEPT4O43236 478 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 SLITRK3O94933 977 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 AKR1A1P14550 325 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 FAM160A1Q05DH4 1040 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 HSDL1Q3SXM5 330 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 HAUS3Q68CZ6 603 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 MIER3Q7Z3K6 550 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 CATSPER3Q86XQ3 398 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 ERMNQ8TAM6 284 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 NEK9Q8TD19 979 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 SNX29Q8TEQ0 813 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 MLXIPQ9HAP2 919 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 TUFT1Q9NNX1 390 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 KCNH3Q9ULD8 1083 aa15.77■□□□□ 0.12
SEC61B-201ENST00000223641 CHMP2AO43633 222 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 DUSP11O75319 330 aaKnown RBP15.76■□□□□ 0.11
SEC61B-201ENST00000223641 MED24O75448 989 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 NR1I2O75469 434 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 MBD3O95983 291 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 P4HBP07237 508 aaKnown RBP15.76■□□□□ 0.11
SEC61B-201ENST00000223641 HOXD8P13378 290 aaPredicted RBP15.76■□□□□ 0.11
SEC61B-201ENST00000223641 PRKAR2AP13861 404 aaKnown RBP15.76■□□□□ 0.11
SEC61B-201ENST00000223641 TXLNAP40222 546 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 LBX1P52954 281 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 NKX3-2P78367 333 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 GRB10Q13322 594 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 E2F4Q16254 413 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 ECM1Q16610 540 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 TMEM119Q4V9L6 283 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
SEC61B-201ENST00000223641 PPTC7Q8NI37 304 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 SEPT1Q8WYJ6 367 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 PNMA5Q96PV4 448 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 GPR20Q99678 358 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 TCEAL9Q9UHQ7 104 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 CENPFP49454 3210 aa15.76■□□□□ 0.11
SEC61B-201ENST00000223641 KDM3AQ9Y4C1 1321 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 A6NJR5 290 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 ZNF202O95125 648 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 LYPLA2O95372 231 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 INHAP05111 366 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 SUPT20HL2P0C7V6 817 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 PTGS1P23219 599 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 CCND3P30281 292 aaPredicted RBP15.75■□□□□ 0.11
SEC61B-201ENST00000223641 SYKP43405 635 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 KARSQ15046 597 aaKnown RBP15.75■□□□□ 0.11
SEC61B-201ENST00000223641 NAALADL2Q58DX5 795 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 CTU1Q7Z7A3 348 aaKnown RBP15.75■□□□□ 0.11
SEC61B-201ENST00000223641 LRRC15Q8TF66 581 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 CALML4Q96GE6 196 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 DYDC2Q96IM9 177 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 TIGD1Q96MW7 591 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 PYM1Q9BRP8 204 aaKnown RBP15.75■□□□□ 0.11
SEC61B-201ENST00000223641 NT5C3AQ9H0P0 336 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 RGL1Q9NZL6 768 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 CCDC39Q9UFE4 941 aa15.75■□□□□ 0.11
SEC61B-201ENST00000223641 MYH9P35579 1960 aaKnown RBP15.75■□□□□ 0.11
SEC61B-201ENST00000223641 POTEB3A0JP26 581 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 POLR2DO15514 142 aaKnown RBP15.74■□□□□ 0.11
SEC61B-201ENST00000223641 PPFIA4O75335 1185 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 LGR5O75473 907 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 PSAPP07602 524 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 TCF7P36402 384 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms