RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 PPFIA3O75145 1194 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 ADAM17P78536 824 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 ARHGAP4P98171 946 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 APOBRQ0VD83 1088 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 RUFY4Q6ZNE9 571 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 ZBED2Q9BTP6 218 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 MTUS1Q9ULD2 1270 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 MTCH2Q9Y6C9 303 aa25.38■■□□□ 1.65
VTI1B-201ENST00000216456 ABHD14A-ACY1A0A1B0GW23 586 aa25.37■■□□□ 1.65
VTI1B-201ENST00000216456 KIF28PB7ZC32 967 aa25.37■■□□□ 1.65
VTI1B-201ENST00000216456 ADD1P35611 737 aaKnown RBP25.37■■□□□ 1.65
VTI1B-201ENST00000216456 MTMR1Q13613 665 aa25.37■■□□□ 1.65
VTI1B-201ENST00000216456 IKBKEQ14164 716 aa25.37■■□□□ 1.65
VTI1B-201ENST00000216456 CCDC136Q96JN2 1154 aa25.37■■□□□ 1.65
VTI1B-201ENST00000216456 JADE2Q9NQC1 790 aa25.37■■□□□ 1.65
VTI1B-201ENST00000216456 RBM28Q9NW13 759 aaKnown RBP25.37■■□□□ 1.65
VTI1B-201ENST00000216456 GJB5O95377 273 aa25.36■■□□□ 1.65
VTI1B-201ENST00000216456 PARNO95453 639 aaKnown RBP25.36■■□□□ 1.65
VTI1B-201ENST00000216456 MKRN4PQ13434 485 aaPredicted RBP25.36■■□□□ 1.65
VTI1B-201ENST00000216456 JAKMIP1Q96N16 626 aaKnown RBP25.36■■□□□ 1.65
VTI1B-201ENST00000216456 UIMC1Q96RL1 719 aa25.36■■□□□ 1.65
VTI1B-201ENST00000216456 PCYT2Q99447 389 aa25.36■■□□□ 1.65
VTI1B-201ENST00000216456 SNX14Q9Y5W7 946 aa25.36■■□□□ 1.65
VTI1B-201ENST00000216456 PRRC2BQ5JSZ5 2229 aaKnown RBP25.36■■□□□ 1.65
VTI1B-201ENST00000216456 LPXNO60711 386 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 ARP10275 920 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 GRB10Q13322 594 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 TJAP1Q5JTD0 557 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 Q6ZUG5 572 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 GDPD5Q8WTR4 605 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 KCNB2Q92953 911 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 RIC8AQ9NPQ8 531 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 THEGQ9P2T0 379 aa25.35■■□□□ 1.65
VTI1B-201ENST00000216456 ZNF215Q9UL58 517 aaPredicted RBP25.35■■□□□ 1.65
VTI1B-201ENST00000216456 TTC28Q96AY4 2481 aa25.34■■□□□ 1.65
VTI1B-201ENST00000216456 TFF2Q03403 129 aa25.34■■□□□ 1.65
VTI1B-201ENST00000216456 PLEKHG4Q58EX7 1191 aa25.34■■□□□ 1.65
VTI1B-201ENST00000216456 SEPT1Q8WYJ6 367 aa25.34■■□□□ 1.65
VTI1B-201ENST00000216456 ANO3Q9BYT9 981 aa25.34■■□□□ 1.65
VTI1B-201ENST00000216456 MUC3AQ02505 3323 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 SMCO2A6NFE2 343 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 HSPA4P34932 840 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 ADCY7P51828 1080 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 KRT32Q14532 448 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 MYOCDQ8IZQ8 938 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 BRF1Q92994 677 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 MXRA8Q9BRK3 442 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 KCNH7Q9NS40 1196 aa25.33■■□□□ 1.65
VTI1B-201ENST00000216456 LINC01553A4QN01 128 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 CHRNA1P02708 482 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 IGBP1P78318 339 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 ITGB3BPQ13352 177 aaPredicted RBP25.32■■□□□ 1.64
VTI1B-201ENST00000216456 GIMAP8Q8ND71 665 aaPredicted RBP25.32■■□□□ 1.64
VTI1B-201ENST00000216456 GLG1Q92896 1179 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 CDHR1Q96JP9 859 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 ASB2Q96Q27 587 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 RAD9AQ99638 391 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 BARHL2Q9NY43 387 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 EMSYQ7Z589 1322 aa25.32■■□□□ 1.64
VTI1B-201ENST00000216456 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.31■■□□□ 1.64
VTI1B-201ENST00000216456 METAP2P50579 478 aaKnown RBP eCLIP25.31■■□□□ 1.64
VTI1B-201ENST00000216456 FGD1P98174 961 aa25.31■■□□□ 1.64
VTI1B-201ENST00000216456 PPFIA1Q13136 1202 aa25.31■■□□□ 1.64
VTI1B-201ENST00000216456 SKIV2LQ15477 1246 aaKnown RBP25.31■■□□□ 1.64
VTI1B-201ENST00000216456 GRIK4Q16099 956 aa25.31■■□□□ 1.64
VTI1B-201ENST00000216456 MARCH8Q5T0T0 291 aa25.31■■□□□ 1.64
VTI1B-201ENST00000216456 JAKMIP3Q5VZ66 844 aa25.31■■□□□ 1.64
VTI1B-201ENST00000216456 COL4A4P53420 1690 aaPredicted RBP25.31■■□□□ 1.64
VTI1B-201ENST00000216456 GNAT1P11488 350 aa25.3■■□□□ 1.64
VTI1B-201ENST00000216456 CLK2P49760 499 aaKnown RBP25.3■■□□□ 1.64
VTI1B-201ENST00000216456 PPP1R18Q6NYC8 613 aa25.3■■□□□ 1.64
VTI1B-201ENST00000216456 TRAPPC12Q8WVT3 735 aa25.3■■□□□ 1.64
VTI1B-201ENST00000216456 ATXN2LQ8WWM7 1075 aaKnown RBP25.3■■□□□ 1.64
VTI1B-201ENST00000216456 JPH1Q9HDC5 661 aaPredicted RBP25.3■■□□□ 1.64
VTI1B-201ENST00000216456 NRCAMQ92823 1304 aa25.3■■□□□ 1.64
VTI1B-201ENST00000216456 MICAL3Q7RTP6 2002 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 DDX39AO00148 427 aaKnown RBP25.29■■□□□ 1.64
VTI1B-201ENST00000216456 GTPBP6O43824 516 aaPredicted RBP25.29■■□□□ 1.64
VTI1B-201ENST00000216456 UPP2O95045 317 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 GHRP10912 638 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 PKN1Q16512 942 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 SEPT8Q92599 483 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 PHKBQ93100 1093 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 C17orf80Q9BSJ5 609 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 SUGCTQ9HAC7 445 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 AGO4Q9HCK5 861 aaKnown RBP25.29■■□□□ 1.64
VTI1B-201ENST00000216456 ERAP1Q9NZ08 941 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 SLC9A2Q9UBY0 812 aa25.29■■□□□ 1.64
VTI1B-201ENST00000216456 EFCAB14O75071 495 aa25.28■■□□□ 1.64
VTI1B-201ENST00000216456 AMHP03971 560 aa25.28■■□□□ 1.64
VTI1B-201ENST00000216456 HMGB1P09429 215 aaKnown RBP25.28■■□□□ 1.64
VTI1B-201ENST00000216456 POU3F3P20264 500 aaPredicted RBP25.28■■□□□ 1.64
VTI1B-201ENST00000216456 ACTR2P61160 394 aa25.28■■□□□ 1.64
VTI1B-201ENST00000216456 PFKFB3Q16875 520 aaPredicted RBP25.28■■□□□ 1.64
VTI1B-201ENST00000216456 CEP55Q53EZ4 464 aa25.28■■□□□ 1.64
VTI1B-201ENST00000216456 FAM26DQ5JW98 314 aa25.28■■□□□ 1.64
VTI1B-201ENST00000216456 BLOC1S2Q6QNY1 142 aa25.28■■□□□ 1.64
VTI1B-201ENST00000216456 DNAJB3Q8WWF6 145 aa25.28■■□□□ 1.64
VTI1B-201ENST00000216456 NECAB3Q96P71 396 aaPredicted RBP25.28■■□□□ 1.64
VTI1B-201ENST00000216456 EHMT1Q9H9B1 1298 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms