RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 hCG_1984214I3L0E3 225 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 SLC4A1P02730 911 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 CDC25BP30305 580 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 ZBED6P86452 979 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 TCP11X2Q5H9J9 407 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 ZNF713Q8N859 430 aaPredicted RBP20.44■□□□□ 0.86
MBD3-201ENST00000156825 GSG1L2A8MUP6 293 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 ECE2O60344 883 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 BIRC2Q13490 618 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 PPP2R5EQ16537 467 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 HAUS1Q96CS2 278 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 TMEM206Q9H813 350 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 DNAJC17Q9NVM6 304 aaKnown RBP20.44■□□□□ 0.86
MBD3-201ENST00000156825 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.44■□□□□ 0.86
MBD3-201ENST00000156825 ZCCHC11Q5TAX3 1644 aaKnown RBP20.44■□□□□ 0.86
MBD3-201ENST00000156825 K7ERI5 159 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 RPS6KA2Q15349 733 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 SGO2Q562F6 1265 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 RABGGTAQ92696 567 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 AP1M1Q9BXS5 423 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 DAAM1Q9Y4D1 1078 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 TROVE2P10155 538 aaKnown RBP eCLIP20.43■□□□□ 0.86
MBD3-201ENST00000156825 A2ML1A8K2U0 1454 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 MB21D2Q8IYB1 491 aaPredicted RBP20.43■□□□□ 0.86
MBD3-201ENST00000156825 CACNA2D3Q8IZS8 1091 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 ARHGAP25P42331 645 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 KIF11P52732 1056 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 FOXO4P98177 505 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 NFX1Q12986 1120 aaKnown RBP20.43■□□□□ 0.86
MBD3-201ENST00000156825 POTEDQ86YR6 584 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 RTKN2Q8IZC4 609 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 ISCA1Q9BUE6 129 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 KLHL14Q9P2G3 628 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 ZBTB5O15062 677 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 RESP18Q5W5W9 173 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 CCDC170Q8IYT3 715 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 CDHR1Q96JP9 859 aa20.43■□□□□ 0.86
MBD3-201ENST00000156825 ARHGAP42A6NI28 874 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 PFKFB3Q16875 520 aaPredicted RBP20.42■□□□□ 0.86
MBD3-201ENST00000156825 WRNIP1Q96S55 665 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 EFCC1Q9HA90 598 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 ZKSCAN8Q15776 578 aaPredicted RBP20.42■□□□□ 0.86
MBD3-201ENST00000156825 MAP7D3Q8IWC1 876 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 FAM84BQ96KN1 310 aaPredicted RBP20.42■□□□□ 0.86
MBD3-201ENST00000156825 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 ARL6IP4Q66PJ3 421 aaKnown RBP20.42■□□□□ 0.86
MBD3-201ENST00000156825 ARMC9Q7Z3E5 817 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 FAM160B2Q86V87 743 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 SLC10A4Q96EP9 437 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 GPSM2P81274 684 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 OR6B2Q6IFH4 312 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 MCUQ8NE86 351 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 UBE2Q2Q8WVN8 375 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 SNX25Q9H3E2 840 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 TBK1Q9UHD2 729 aa20.42■□□□□ 0.86
MBD3-201ENST00000156825 PSAPP07602 524 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 RNASELQ05823 741 aaKnown RBP20.41■□□□□ 0.86
MBD3-201ENST00000156825 MIS12Q9H081 205 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 POTEB3A0JP26 581 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 POTECB2RU33 542 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 SPP2Q13103 211 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 POTEBQ6S5H4 581 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 CAPN7Q9Y6W3 813 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 PRR29P0C7W0 189 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 TSTA3Q13630 321 aaPredicted RBP20.41■□□□□ 0.86
MBD3-201ENST00000156825 DNAJC24Q6P3W2 148 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 SFR1Q86XK3 245 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 SKA2Q8WVK7 121 aaPredicted RBP20.41■□□□□ 0.86
MBD3-201ENST00000156825 PIM2Q9P1W9 311 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 LRRD1A4D1F6 860 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 KRT1P04264 644 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 GSTA1P08263 222 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 GSTA2P09210 222 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 NFIXQ14938 502 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 THAP9Q9H5L6 903 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 PCDHA13Q9Y5I0 950 aa20.41■□□□□ 0.86
MBD3-201ENST00000156825 PDE1BQ01064 536 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 RINT1Q6NUQ1 792 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 ALKBH5Q6P6C2 394 aaKnown RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 PDZD4Q76G19 769 aaPredicted RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 RPUSD2Q8IZ73 545 aaKnown RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 PGRMC1O00264 195 aaKnown RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 STAG2Q8N3U4 1231 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 MB21D1Q8N884 522 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 MSTO1Q9BUK6 570 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 TYW1Q9NV66 732 aaKnown RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 FOXN1O15353 648 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 ACTN1P12814 892 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 STAT3P40763 770 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 LIG3P49916 1009 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 TXNRD1Q16881 649 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 JPH2Q9BR39 696 aaPredicted RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 ABCB11O95342 1321 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 GOLGA8KD6RF30 607 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 NOL3O60936 208 aaKnown RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 ATXN8OSP0DMR3 200 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 RFX1P22670 979 aa20.4■□□□□ 0.86
MBD3-201ENST00000156825 BASP1P80723 227 aaKnown RBP20.4■□□□□ 0.86
MBD3-201ENST00000156825 CDO1Q16878 200 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms