RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 DCAF4Q8WV16 495 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 MKL1Q969V6 931 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.51□□□□□ -0.09
CTNS-201ENST00000046640 EHD2Q9NZN4 543 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 MYO3BQ8WXR4 1341 aa14.51□□□□□ -0.09
CTNS-201ENST00000046640 PLSCR1O15162 318 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 KRT86O43790 486 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 GCFC2P16383 781 aaKnown RBP14.5□□□□□ -0.09
CTNS-201ENST00000046640 CYP11B2P19099 503 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 SLC7A5Q01650 507 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 PPARDQ03181 441 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 TUBB2AQ13885 445 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 SPA17Q15506 151 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 DNAJC21Q5F1R6 531 aaKnown RBP14.5□□□□□ -0.09
CTNS-201ENST00000046640 ARSHQ5FYA8 562 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 SYDE2Q5VT97 1194 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 TATDN1Q6P1N9 297 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 TUBB2BQ9BVA1 445 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 VEZTQ9HBM0 779 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 RGL1Q9NZL6 768 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 SMCHD1A6NHR9 2005 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 FOCADQ5VW36 1801 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
CTNS-201ENST00000046640 GGCXP38435 758 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 EHHADHQ08426 723 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 LRRC31Q6UY01 552 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 IKZF4Q9H2S9 585 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 KCNMB3Q9NPA1 279 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 MYH10P35580 1976 aa14.5□□□□□ -0.09
CTNS-201ENST00000046640 RSPH10B2B2RC85 870 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 ZBTB39O15060 712 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 SYF2O95926 243 aaKnown RBP14.49□□□□□ -0.09
CTNS-201ENST00000046640 RSPH10BP0C881 870 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 PPP1R2P41236 205 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 LRRC63Q05C16 580 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 GFPT1Q06210 699 aaPredicted RBP14.49□□□□□ -0.09
CTNS-201ENST00000046640 KIF5AQ12840 1032 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 TDRD12Q587J7 1177 aaKnown RBP14.49□□□□□ -0.09
CTNS-201ENST00000046640 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 SCFD1Q8WVM8 642 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 IFIH1Q9BYX4 1025 aaKnown RBP14.49□□□□□ -0.09
CTNS-201ENST00000046640 NT5C3AQ9H0P0 336 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 EMILIN3Q9NT22 766 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 PSD3Q9NYI0 1048 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 MYO1AQ9UBC5 1043 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 COL11A2P13942 1736 aaPredicted RBP14.49□□□□□ -0.09
CTNS-201ENST00000046640 MOCS3O95396 460 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 FKBP3Q00688 224 aaKnown RBP14.49□□□□□ -0.09
CTNS-201ENST00000046640 KCNMA1Q12791 1236 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 CCDC65Q8IXS2 484 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 PIGOQ8TEQ8 1089 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 HDAC7Q8WUI4 952 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 ACBD3Q9H3P7 528 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 SERPINA10Q9UK55 444 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 PRR12Q9ULL5 1215 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 COL4A3BPQ9Y5P4 624 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 SLX4Q8IY92 1834 aa14.49□□□□□ -0.09
CTNS-201ENST00000046640 OPLAHO14841 1288 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 USP11P51784 963 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 KIF11P52732 1056 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 ADAM9Q13443 819 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 FAM83BQ5T0W9 1011 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 TRMT1LQ7Z2T5 733 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 AFAP1L1Q8TED9 768 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 LRRC27Q9C0I9 530 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 CAPN6Q9Y6Q1 641 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 EIF3CLB5ME19 914 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 PSMD14O00487 310 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 PRPF6O94906 941 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 NAP1L1P55209 391 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 POLR2FP61218 127 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 SEMA3FQ13275 785 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 CTTNQ14247 550 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 KCTD19Q17RG1 926 aaPredicted RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 EIF3CQ99613 913 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 TSPYL1Q9H0U9 437 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 BHMT2Q9H2M3 363 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 ZNF277Q9NRM2 450 aaPredicted RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 HPCAL4Q9UM19 191 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 PLAGL2Q9UPG8 496 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 EML1O00423 815 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 MSH4O15457 936 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 BUB1O43683 1085 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 FGFR1OPO95684 399 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 EN1Q05925 392 aaPredicted RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 KCNA1Q09470 495 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 DNAAF5Q86Y56 855 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 ETNPPLQ8TBG4 499 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 LSM14BQ9BX40 385 aaKnown RBP14.48□□□□□ -0.09
CTNS-201ENST00000046640 PCDHA13Q9Y5I0 950 aa14.48□□□□□ -0.09
CTNS-201ENST00000046640 KDM3AQ9Y4C1 1321 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 SPATA31C1P0DKV0 1188 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 RASSF7Q02833 373 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 PSMD2Q13200 908 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 CC2D2BQ6DHV5 1058 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 SFR1Q86XK3 245 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 FLAD1Q8NFF5 587 aa14.47□□□□□ -0.09
CTNS-201ENST00000046640 SECISBP2LQ93073 1101 aaKnown RBP14.47□□□□□ -0.09
CTNS-201ENST00000046640 LENG9Q96B70 501 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms