RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Pcdha4O88689 947 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Gna14P30677 355 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Pcif1P59114 706 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Tcerg1lQ3B807 590 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Spout1Q3UHX9 385 aaKnown RBP12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Fam196bQ6GQV1 535 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 NfrkbQ6PIJ4 1296 aaKnown RBP12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Krt9Q6RHW0 743 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Chtf18Q8BIW9 969 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Slc13a4Q8BZ82 625 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 LgsnQ8CIX8 563 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Bhmt2Q91WS4 363 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Osbpl1aQ91XL9 950 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 F11Q91Y47 624 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Rfc4Q99J62 364 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Coro7Q9D2V7 922 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Smco2Q9DA21 347 aa12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Add1Q9QYC0 735 aaKnown RBP12.74□□□□□ -0.37
Trim11-202ENSMUST00000108809 Col1a1P11087 1453 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Terf1P70371 421 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Lrig2Q52KR2 1054 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Tbc1d9bQ5SVR0 1263 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Ccpg1Q640L3 753 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Ncapg2Q6DFV1 1138 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Actn1Q7TPR4 892 aaKnown RBP12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Kiaa1024Q8K3V7 917 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Asic2Q925H0 512 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Trap1Q9CQN1 706 aaKnown RBP12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Ppp2r3dQ9Z176 491 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Mtcl1Q3UHU5 1945 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Myh14Q6URW6 2000 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 P4hbP09103 509 aaKnown RBP12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 D1Pas1P16381 660 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Nlrp2Q4PLS0 1046 aaKnown RBP12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 3830417A13RikQ8BQJ2 303 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 MslnlQ8C160 685 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 P3h4Q8K2B0 443 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Sept14Q9DA97 430 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Nap1l5Q9JJF0 156 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 CenphQ9QYM8 241 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 ArcQ9WV31 396 aa12.73□□□□□ -0.37
Trim11-202ENSMUST00000108809 Tcp10bE9PYJ0 438 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Copb2O55029 905 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Nr2f2P43135 414 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Rbm46P86049 533 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Nhej1Q3KNJ2 295 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Ift20Q61025 132 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Six2Q62232 296 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Yipf1Q91VU1 306 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Msantd4Q91YU3 345 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Alg1Q921Q3 482 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Golgb1E9PVZ8 3238 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Ttll10A4Q9F3 704 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Sec24cG3X972 1096 aaKnown RBP12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Dpcr1Q3TNW5 500 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Bbof1Q3V079 533 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Asap3Q5U464 904 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Krt74Q6IFZ9 495 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 March6Q6ZQ89 909 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Usp38Q8BW70 1042 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Sumf1Q8R0F3 372 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 TxlnbQ8VBT1 685 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Rpap2Q8VC34 614 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Dqx1Q924H9 718 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Slc5a5Q99PN0 618 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Arl2bpQ9D385 163 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 EmcnQ9R0H2 261 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Sept3Q9Z1S5 350 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Cetn3O35648 167 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Becn2P0DM65 447 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Rsad1Q5SUV1 442 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Brip1Q5SXJ3 1174 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Klra4Q60651 263 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 BC048507Q80ZS7 89 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Znf771Q8BJ90 317 aa12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Luc7lQ9CYI4 371 aaKnown RBP12.72□□□□□ -0.37
Trim11-202ENSMUST00000108809 Spocd1B1ASB6 936 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Trappc11B2RXC1 1133 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Epha7Q61772 998 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Dhx37Q6NZL1 1150 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Naa35Q6PHQ8 725 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Tmc4Q7TQ65 694 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Slc51bQ80WK2 128 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Ttc22Q8C159 568 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Oxnad1Q8VE38 311 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Six6os1Q9CTN5 574 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Krt36B1AQ75 473 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Fam71aB7XG49 585 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Guca2bO09051 106 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Sema6bO54951 886 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Lmnb2P21619 596 aaKnown RBP12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Mmp14P53690 582 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Dok7Q18PE0 504 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Muc3aQ3U5A2 218 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Skap1Q3UUV5 355 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Zrsr2Q62377 462 aaKnown RBP12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Atp2b4Q6Q477 1205 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 SugctQ7TNE1 436 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Fnbp1Q80TY0 616 aa12.71□□□□□ -0.37
Trim11-202ENSMUST00000108809 Bola2Q8BGS2 86 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms