RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Klrb1fQ8VD98 217 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Usb1Q91W78 267 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Abcb9Q9JJ59 762 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Orc3Q9JK30 715 aaKnown RBP10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Adamts7Q68SA9 1657 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rbbp8nlA2ABX0 614 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Fam129cD3YZB0 591 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Magea4F2Z493 315 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lrrc10bG3XA50 292 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cyth3O08967 399 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Nol4P60954 483 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cdk7Q03147 346 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Q14AM7 275 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Mtus1Q5HZI1 1210 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Itm2aQ61500 263 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ces1eQ64176 562 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gja3Q64448 417 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cep57Q8CEE0 500 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pcdha12Q91Y18 950 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Sf3a3Q9D554 501 aaKnown RBP10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Clcn2Q9R0A1 908 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm10378F6XQQ1 160 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 PrlP06879 226 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 ProcP33587 460 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rab17P35292 214 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Zap70P43404 618 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pold1P52431 1105 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Eef1dP57776 281 aaKnown RBP10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 MamstrQ0ZCJ7 421 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 GnptabQ69ZN6 1235 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Fnbp4Q6ZQ03 1031 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Thoc7Q7TMY4 204 aaKnown RBP10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 CyldQ80TQ2 952 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ttll4Q80UG8 1193 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Hsfy2Q80Y37 392 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Vcpip1Q8CDG3 1220 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Parp10Q8CIE4 960 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Mrps25Q9D125 171 aaKnown RBP10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Klhl10Q9D5V2 608 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cd2apQ9JLQ0 637 aa10.57□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Med23Q80YQ2 1367 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cep170bQ80U49 1574 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cnksr1A2A9K7 700 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm29094F6Q785 221 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 SarsP26638 512 aaKnown RBP10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cwf19l2Q8BG79 887 aaKnown RBP10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ublcp1Q8BGR9 318 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ccdc87Q8CDL9 855 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Edc3Q8K2D3 508 aaKnown RBP10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lgi2Q8K4Z0 550 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Q8R1Y2 203 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tsnaxip1Q99P25 704 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 MthfsQ9D110 203 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Leng1Q9DB98 261 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Kat2aQ9JHD2 830 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Nphs1Q9QZS7 1256 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 VarsQ9Z1Q9 1263 aaKnown RBP10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 B020011L13RikA0A087WQI7 412 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Aff2O55112 1272 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 S100a5P63084 93 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Rcn1Q05186 325 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tmem184cQ3TPR7 525 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Tmem35bQ3U0Y2 150 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Agap2Q3UHD9 1186 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 DeptorQ570Y9 409 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Trpc1Q61056 793 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Foxb2Q64733 428 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ripor1Q68FE6 1223 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cracr2bQ80ZJ8 394 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ubap1Q8BH48 502 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Usp38Q8BW70 1042 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Dnajc17Q91WT4 303 aa10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Fam32aQ9CR80 112 aaKnown RBP10.56□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm5936A2BG95 728 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gm5640A3KG49 728 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Morc3F7BJB9 942 aaKnown RBP10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Wnt7aP24383 349 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pald1P70261 859 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Gsdmc4Q3TR54 480 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 StilQ60988 1262 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cyp7b1Q60991 507 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pcdhga7Q6DD96 935 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Bnip1Q6QD59 228 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Smg5Q6ZPY2 1017 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cdk19Q8BWD8 501 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lrrc4cQ8C031 640 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 NelfbQ8C4Y3 580 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Q8CIL4 281 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Spire2Q8K1S6 718 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lactbl1S4R213 581 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Cfap70D3YVL2 1141 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Hnrnph3D3Z3N4 346 aaKnown RBP10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Fyb1O35601 819 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Pde6bP23440 856 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Ces1cP23953 554 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Vav1P27870 845 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Mark2Q05512 776 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Lrfn1Q2WF71 766 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 TchpQ3TVW5 497 aa10.55□□□□□ -0.72
Hmgb1-201ENSMUST00000085546 Q3U4G0 281 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms