RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Ccdc113Q8C5T8 377 aa9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Tbc1d10cQ8C9V1 444 aa9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 SrrtQ99MR6 875 aaKnown RBP9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Brms1Q99N20 246 aa9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Tmem192Q9CXT7 266 aa9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Eif4e3Q9DBB5 207 aa9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 PfkpQ9WUA3 784 aaKnown RBP9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Tmem131O70472 1877 aa9.9□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Gm11549A0A286YD83 63 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Apol7aB2RT54 418 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Mcm6P97311 821 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Cntnap5bQ0V8T8 1292 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Vwa3aQ3UVV9 1148 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Samhd1Q60710 627 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Zfp943Q6NZP4 507 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Camsap3Q80VC9 1252 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Cyp26b1Q811W2 512 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Ccdc122Q8BVN0 290 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Podxl2Q8CAE9 603 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Amer2Q8CCJ4 672 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 C1qtnf12Q8R2Z0 308 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Dqx1Q924H9 718 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 1700129C05RikQ9CQ77 218 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Ppp1r3gQ9CW07 347 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Tekt1Q9DAJ2 418 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Large1Q9Z1M7 756 aa9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Lama2Q60675 3118 aaKnown RBP9.9□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Gm7086A0A1W2P766 342 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Syce3B5KM66 88 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Lta4hP24527 611 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Gm3414Q3TNU4 584 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Mybpc2Q5XKE0 1136 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Bmp3Q8BHE5 468 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Pnma1Q8C1C8 353 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Dennd2aQ8C4S8 1000 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Pde5aQ8CG03 865 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Ubxn4Q8VCH8 506 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Nrbp2Q91V36 499 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 GneQ91WG8 722 aaKnown RBP9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Spdl1Q923A2 608 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Me2Q99KE1 589 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Kremen1Q99N43 473 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 AacsQ9D2R0 672 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Mx2Q9WVP9 655 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 GsdmeQ9Z2D3 512 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Fam205aA2APU8 1308 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Krt36B1AQ75 473 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Zfp213E9QAW0 468 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Tlk2O55047 718 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 PklrP53657 574 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Aggf1Q7TN31 711 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Ehd2Q8BH64 543 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Caps2Q8BUG5 550 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Rnf208Q8K0W3 265 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 PccaQ91ZA3 724 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Pkd2l2Q9JLG4 621 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Eya4Q9Z191 616 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Fkbp1bQ9Z2I2 108 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 CluhQ5SW19 1315 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Abcb11Q9QY30 1321 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Kiaa0100Q5SYL3 2234 aa9.89□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Herc3A6H6S0 1050 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Arhgap6O54834 987 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Clec11aO88200 328 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 PrkceP16054 737 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 MafbP54841 323 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Mier3Q3UHF3 551 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Slc9a2Q3ZAS0 814 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Clul1Q3ZRW6 464 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Spdye4aQ5IBH6 268 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Serpinb3dQ6UKZ0 387 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Snx17Q8BVL3 470 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 NkrfQ8BY02 690 aaKnown RBP9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Trim9Q8C7M3 817 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Xpo5Q924C1 1204 aaKnown RBP9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 YwhabQ9CQV8 246 aaKnown RBP9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Vnn1Q9Z0K8 512 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Pcdh11xF6ZNL5 1338 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 LctF8VPT3 1931 aa9.88□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Ms4a4aA0A087WRT7 236 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 MtrA6H5Y3 1253 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Sept4P28661 478 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Slc7a1Q09143 622 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Rufy4Q3TYX8 563 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Fam214aQ69ZK7 1075 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Mtmr10Q7TPM9 771 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Fam155aQ8CCS2 467 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Celf3Q8CIN6 465 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Pdlim2Q8R1G6 349 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 GldcQ91W43 1025 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 BccipQ9CWI3 316 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 4931400O07RikQ9D4M5 137 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Ubxn11Q9D572 484 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Nup210lQ9D2F7 1881 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Spryd3E9Q9B3 442 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Gm13128L7MU96 475 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Il2rbP16297 539 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 Bcat1P24288 386 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 PtpreP49446 699 aa9.87□□□□□ -0.83
Ccdc28a-201ENSMUST00000052648 ZbbxQ0P5X5 716 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms