RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Prpf40aQ9R1C7 953 aaKnown RBP16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Pex11aQ9Z211 246 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Senp1P59110 640 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Spata18Q0P557 537 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ccdc148Q6P5U8 527 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Fbxo11Q7TPD1 930 aaKnown RBP16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 MslnlQ8C160 685 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Luc7lQ9CYI4 371 aaKnown RBP16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Cwc15Q9JHS9 229 aaKnown RBP16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Acot3Q9QYR7 432 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Adgrf5G5E8Q8 1348 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Mtcl1Q3UHU5 1945 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 A0A286YCQ6 122 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Zfp984A2A7A2 547 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 AoahO35298 574 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Folh1O35409 752 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 RargP18911 458 aaKnown RBP16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Gna14P30677 355 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Klrg2Q3UM83 387 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Chtf18Q8BIW9 969 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Myl7Q9QVP4 175 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Eif2ak1Q9Z2R9 619 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Col1a1P11087 1453 aa16.53■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Dpcr1Q3TNW5 500 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Agxt2Q3UEG6 513 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Krt9Q6RHW0 743 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Spata2Q8K004 515 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 IntS13Q8QZV7 732 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ces4aQ8R0W5 563 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Dqx1Q924H9 718 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 ArcQ9WV31 396 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Plxnb2B2RXS4 1842 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 AaasP58742 546 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Cct5P80316 541 aaKnown RBP16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Trim43cP86449 446 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Dcaf17Q3TUL7 519 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Lrig2Q52KR2 1054 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Lamc2Q61092 1191 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Usp17leQ7M764 540 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Fam193aQ8CGI1 1231 aaKnown RBP16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Rpap2Q8VC34 614 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 SmapQ9R0P4 181 aaKnown RBP16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Flt1P35969 1333 aa16.52■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Btbd18A0A0A6YY25 723 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Krt36B1AQ75 473 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gucy1b3O54865 620 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 XlrP05531 208 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 OatP29758 439 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Xxylt1Q3U4G3 392 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Hdac10Q6P3E7 666 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ribc1Q9D0B8 379 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Q9D5Q8 446 aa16.52■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Zfp408H7BX78 710 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 NppbP40753 121 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Jdp2P97875 163 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Cct8l1Q80YT3 562 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Pank4Q80YV4 820 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Bola2Q8BGS2 86 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Q8C6G1 249 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Dusp19Q8K4T5 220 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Sertad2Q9JJG5 309 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 P4hbP09103 509 aaKnown RBP16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gna15P30678 374 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Serpinc1P32261 465 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ncf1Q09014 390 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Zc3h18Q0P678 948 aaKnown RBP16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Nlrp4cQ3TKR3 982 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 BcrQ6PAJ1 1270 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Rnf34Q99KR6 376 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Galnt15Q9D2N8 638 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 PpihQ9D868 188 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Prkab1Q9R078 270 aa16.51■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Il13ra2O88786 383 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ighmbp2P40694 993 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Hdhd2Q3UGR5 259 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Fam198bQ3UPI1 517 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Rsad1Q5SUV1 442 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Usp27Q8CEG8 438 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Smco2Q9DA21 347 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 BcamQ9R069 622 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ttll10A4Q9F3 704 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Sec24cG3X972 1096 aaKnown RBP16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ap1b1O35643 943 aaKnown RBP16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Mcm5P49718 733 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gtpbp6Q3U6U5 514 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ddx31Q6NZQ2 687 aaKnown RBP16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Snip1Q8BIZ6 383 aaKnown RBP16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gpr180Q8BPS4 441 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Yars2Q8BYL4 472 aaKnown RBP16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Dcaf8Q8N7N5 591 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 CbsQ91WT9 561 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 PccaQ91ZA3 724 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Ambra1A2AH22 1300 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Trappc11B2RXC1 1133 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Gjc1P28229 396 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Nap1l1P28656 391 aaKnown RBP16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Nhej1Q3KNJ2 295 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 H6pdQ8CFX1 789 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 Slfn14V9GXG1 899 aa16.5■□□□□ 0.23
Nkx3-1-201ENSMUST00000022646 1700016G14RikA0A286YCZ6 238 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms